RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ATG7O95352 703 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 MLYCDO95822 493 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 POLR2LP62875 67 aaKnown RBP8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 IL5RAQ01344 420 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 TNK2Q07912 1038 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 NR6A1Q15406 480 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 NFIL3Q16649 462 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 INTS11Q5TA45 600 aaKnown RBP8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 PGBD3Q8N328 593 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 TCP10LQ8TDR4 215 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 CKAP2Q8WWK9 683 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 LENG9Q96B70 501 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 SERAC1Q96JX3 654 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 Q96MT0 163 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 XPNPEP3Q9NQH7 507 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 ETNK2Q9NVF9 386 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 C3P01024 1663 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 A0A0G2JLW4 131 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SIGLEC16A6NMB1 481 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PEX1O43933 1283 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 WBP4O75554 376 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 RECQL5O94762 991 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CLTBP09497 229 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MYL12AP19105 171 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PSEN1P49768 467 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 EFEMP1Q12805 493 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 DPYSL3Q14195 570 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PROSER1Q86XN7 944 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CLEC10AQ8IUN9 316 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MCOLN3Q8TDD5 553 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 USP7Q93009 1102 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SAE1Q9UBE0 346 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CRYL1Q9Y2S2 319 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PCDHB12Q9Y5F1 795 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MEGF6O75095 1541 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PSMG1O95456 288 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 STAU1O95793 577 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ITGA2P17301 1181 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SMIM11AP58511 58 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 YWHAZP63104 245 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CYP2A13Q16696 494 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 AFTPHQ6ULP2 937 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SLC9A9Q8IVB4 645 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ALLCQ8N6M5 410 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MOSPD2Q8NHP6 518 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ATL1Q8WXF7 558 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 RORBQ92753 470 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ART4Q93070 314 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CCDC28BQ9BUN5 200 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SPATA5L1Q9BVQ7 753 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MUC13Q9H3R2 512 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CATSPERZQ9NTU4 200 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 DERAQ9Y315 318 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CNTNAP2Q9UHC6 1331 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ANKRD26Q9UPS8 1709 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 NCF1BA6NI72 391 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 NCF1CA8MVU1 366 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM25AB3EWG3 89 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM25CB3EWG5 89 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM25GB3EWG6 89 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 NCF1P14598 390 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CXCR2P25025 360 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ALDH5A1P51649 535 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 NDST1P52848 882 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ENPEPQ07075 957 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 TRAF3Q13114 568 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PDZK1Q5T2W1 519 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 TTC27Q6P3X3 843 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 POLNQ7Z5Q5 900 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF605Q86T29 641 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ACTL9Q8TC94 416 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF606Q8WXB4 792 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MIEF2Q96C03 454 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SGF29Q96ES7 293 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PPP1R16AQ96I34 528 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 IDI2Q9BXS1 227 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ADAM33Q9BZ11 813 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 ACTR8Q9H981 624 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 RBM22Q9NW64 420 aaKnown RBP eCLIP8.52□□□□□ -1.052e-12■■■■■ 66.5
SPTLC3-201ENST00000399002 MTF2Q9Y483 593 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MAP2P11137 1827 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 LRRC10BA6NIK2 292 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 WWP2O00308 870 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MYL12BO14950 172 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MAGEC1O60732 1142 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 CABYRO75952 493 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 LTA4HP09960 611 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 RPL22P35268 128 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SPIRE1Q08AE8 756 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 EZH2Q15910 746 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 AAGABQ6PD74 315 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 GLT6D1Q7Z4J2 308 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MILR1Q7Z6M3 343 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 PSTKQ8IV42 348 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 REPS2Q8NFH8 660 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 MTMR9Q96QG7 549 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 GPRC5CQ9NQ84 441 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 SH3BP4Q9P0V3 963 aa8.52□□□□□ -1.05
SPTLC3-201ENST00000399002 RSL24D1Q9UHA3 163 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms