RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 CCDC14Q49A88 953 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 FNDC3BQ53EP0 1204 aaKnown RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 FSCBQ5H9T9 825 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 SPDYCQ5MJ68 293 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 ZNF571Q7Z3V5 609 aaPredicted RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 METTL3Q86U44 580 aaKnown RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 CIR1Q86X95 450 aaPredicted RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 FAM131BQ86XD5 332 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 ZNF683Q8IZ20 524 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 MCOLN2Q8IZK6 566 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 PGBD3Q8N328 593 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 SORCS1Q8WY21 1168 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 CENPIQ92674 756 aaPredicted RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 IGSF8Q969P0 613 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 MRGPRX1Q96LB2 322 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 PPP1R9BQ96SB3 815 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 DUSP15Q9H1R2 295 aaPredicted RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 ANLNQ9NQW6 1124 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 INTS6Q9UL03 887 aaKnown RBP13.17□□□□□ -0.3
VPREB3-202ENST00000398465 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 CEP250Q9BV73 2442 aa13.17□□□□□ -0.3
VPREB3-202ENST00000398465 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 WASH3PC4AMC7 463 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 EPHX1P07099 455 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 RRM1P23921 792 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
VPREB3-202ENST00000398465 GGCXP38435 758 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 ZNF143P52747 638 aaPredicted RBP13.16□□□□□ -0.3
VPREB3-202ENST00000398465 ATXN1P54253 815 aaKnown RBP13.16□□□□□ -0.3
VPREB3-202ENST00000398465 HDAC4P56524 1084 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 ST8SIA6P61647 398 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 ATP11AP98196 1134 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 SULT2A1Q06520 285 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 CDO1Q16878 200 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 LRRC31Q6UY01 552 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 SLC36A4Q6YBV0 504 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 VPS36Q86VN1 386 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 CYB5D2Q8WUJ1 264 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 NTAN1Q96AB6 310 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 MYO19Q96H55 970 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 MCEEQ96PE7 176 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 XPO4Q9C0E2 1151 aaKnown RBP13.16□□□□□ -0.3
VPREB3-202ENST00000398465 TBC1D30Q9Y2I9 924 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPREB3-202ENST00000398465 SPTBN4Q9H254 2564 aa13.16□□□□□ -0.3
VPREB3-202ENST00000398465 TP53BP1Q12888 1972 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 E9PAM4 449 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 IGLV3-19P01714 112 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 SERPING1P05155 500 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 MYBL1P10243 752 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 BCKDHBP21953 392 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 DPP6P42658 865 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 IRAK1P51617 712 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 COPAP53621 1224 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 AIF1P55008 147 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 LMNB2Q03252 620 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 SCAPQ12770 1279 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 ZNF177Q13360 481 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 CSRP2Q16527 193 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 TDRD12Q587J7 1177 aaKnown RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 RNF219Q5W0B1 726 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 HGSNATQ68CP4 663 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 LPCAT2Q7L5N7 544 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 SETD3Q86TU7 594 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 OR2T3Q8NH03 318 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 FAM172AQ8WUF8 416 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 PRCCQ92733 491 aaPredicted RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 MRGPRX3Q96LB0 322 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 CNPY3Q9BT09 278 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 SIK2Q9H0K1 926 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 RETREG1Q9H6L5 497 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 PRDM16Q9HAZ2 1276 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 TAS2R14Q9NYV8 317 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 USP36Q9P275 1121 aaKnown RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 PPARGC1AQ9UBK2 798 aaKnown RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
VPREB3-202ENST00000398465 SCINQ9Y6U3 715 aa13.15□□□□□ -0.3
VPREB3-202ENST00000398465 IGHV1OR15-9A0A0B4J2B8 117 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 DRGXA6NNA5 263 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 DDX3XO00571 662 aaKnown RBP eCLIP13.14□□□□□ -0.31
VPREB3-202ENST00000398465 DCLK1O15075 740 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 AP5Z1O43299 807 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 CCP110O43303 1012 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 RTN2O75298 545 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 GJB6O95452 261 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 TGM1P22735 817 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 MPLP40238 635 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 ECT2LQ008S8 904 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 ZBTB16Q05516 673 aa13.14□□□□□ -0.31
VPREB3-202ENST00000398465 HNRNPA1L2Q32P51 320 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms