RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 SLC35B2Q8TB61 432 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 PNPT1Q8TCS8 783 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 CRYGNQ8WXF5 182 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 TFAP2CQ92754 450 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 DUS3LQ96G46 650 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 CNDP1Q96KN2 507 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 UHRF1Q96T88 793 aaPredicted RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 YTHDF1Q9BYJ9 559 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 SMARCAD1Q9H4L7 1026 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 HMG20AQ9NP66 347 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 PARVAQ9NVD7 372 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 THG1LQ9NWX6 298 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 POU2F3Q9UKI9 436 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 RABL2BQ9UNT1 228 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 LOC105371267A0A1B0GV96 52 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 ILVBLA1L0T0 632 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 HTRA2O43464 458 aaPredicted RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 TIMM44O43615 452 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 KLHL41O60662 606 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 P4HBP07237 508 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 CD58P19256 250 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 MYF6P23409 242 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 ADSLP30566 484 aaPredicted RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 SREBF1P36956 1147 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 GABRB2P47870 512 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 THOP1P52888 689 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 CDH15P55291 814 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 PPP3CAQ08209 521 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 RFTN1Q14699 578 aaPredicted RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 COG2Q14746 738 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 RAB39AQ14964 217 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 BBS9Q3SYG4 887 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 CCDC14Q49A88 953 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 LIN9Q5TKA1 542 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 MBLAC2Q68D91 279 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 RINT1Q6NUQ1 792 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 PPP1R2P3Q6NXS1 205 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 GALNT18Q6P9A2 607 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 DCP2Q8IU60 420 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 C12orf56Q8IXR9 622 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 EXOC8Q8IYI6 725 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 PGAM4Q8N0Y7 254 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 TRIB2Q92519 343 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 TMA16Q96EY4 203 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 PDZD7Q9H5P4 517 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 GPN2Q9H9Y4 310 aaPredicted RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 MRPL40Q9NQ50 206 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 DDX4Q9NQI0 724 aaKnown RBP11.76□□□□□ -0.53
PUM3-202ENST00000397885 XPNPEP1Q9NQW7 623 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 CNGB3Q9NQW8 809 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 SACM1LQ9NTJ5 587 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 HACD3Q9P035 362 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 FZD1Q9UP38 647 aa11.76□□□□□ -0.53
PUM3-202ENST00000397885 CASP8AP2Q9UKL3 1982 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 C1orf232A0A0U1RR37 186 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 RGSL1A5PLK6 1076 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 CYB561D2O14569 222 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 ZNF195O14628 629 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 ACOT8O14734 319 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 MEIS2O14770 477 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 XRCC1P18887 633 aaPredicted RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 TGM1P22735 817 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 MZF1P28698 734 aaPredicted RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 POLR2BP30876 1174 aaKnown RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 ADAM17P78536 824 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 NRF1Q16656 503 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 ANKRD22Q5VYY1 191 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 TTC33Q6PID6 262 aaPredicted RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 ANKRD13BQ86YJ7 626 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 DSELQ8IZU8 1212 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 MFSD2AQ8NA29 543 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 FAM47BQ8NA70 645 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 RP9Q8TA86 221 aaKnown RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 VCPIP1Q96JH7 1222 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 FIZ1Q96SL8 496 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 HOXD1Q9GZZ0 328 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 NANOGQ9H9S0 305 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 FAM172BPA6NC97 362 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 MSI1O43347 362 aaKnown RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 AKAP10O43572 662 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 NUAK1O60285 661 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 JRKO75564 520 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 PIAS1O75925 651 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 ALDH1A1P00352 501 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 IFNB1P01574 187 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 KRT6AP02538 564 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 C1QAP02745 245 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 KRT6BP04259 564 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 SERPINE1P05121 402 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 NCF2P19878 526 aaPredicted RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 MAP4P27816 1152 aaKnown RBP11.75□□□□□ -0.53
PUM3-202ENST00000397885 TRAF2Q12933 501 aa11.75□□□□□ -0.53
PUM3-202ENST00000397885 PMS2P3Q13401 168 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms