RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 RHBDF2Q6PJF5 856 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 CHRDL2Q6WN34 429 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 CPLX4Q7Z7G2 160 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 BBOF1Q8ND07 529 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 MRPS31Q92665 395 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 SERPINB12Q96P63 405 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 FRMD8P1Q9BZ68 369 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 PRDM16Q9HAZ2 1276 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 DNPEPQ9ULA0 475 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 HS3ST4Q9Y661 456 aa19.9■□□□□ 0.78
PDLIM2-204ENST00000397760 HNRNPA1P09651 372 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 SRGAP2BP0DMP2 458 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 PTPN2P17706 415 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 KCNQ1P51787 676 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 MLLT6P55198 1093 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 CYP4F8P98187 520 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 DUSP6Q16828 381 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 ZNF697Q5TEC3 545 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 TXNDC8Q6A555 127 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 DRICH1Q6PGQ1 229 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 ELMSAN1Q6PJG2 1045 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 CEP128Q6ZU80 1094 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 ATL2Q8NHH9 583 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 SNF8Q96H20 258 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 BTN2A3PQ96KV6 586 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 C1orf74Q96LT6 269 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 ZNF317Q96PQ6 595 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 GCNAQ96QF7 691 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 ATXN3LQ9H3M9 355 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 ETNK2Q9NVF9 386 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 HCFC1R1Q9NWW0 138 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 CAPN7Q9Y6W3 813 aa19.89■□□□□ 0.77
PDLIM2-204ENST00000397760 XYLBO75191 536 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 TCEA3O75764 348 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 RGS19P49795 217 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 KCTD19Q17RG1 926 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 RNF187Q5TA31 235 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 NUGGCQ68CJ6 796 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 NCBP2-AS2Q69YL0 99 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 UNC45BQ8IWX7 931 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 SLC35B2Q8TB61 432 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 CCDC114Q96M63 670 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 CYP2S1Q96SQ9 504 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 ADAM7Q9H2U9 754 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 ZDHHC7Q9NXF8 308 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 HEY1Q9Y5J3 304 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 GOLGA6L7A0A1B0GV03 622 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 A0A1W2PRU2 124 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 MBL2P11226 248 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 CHN1P15882 459 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 ERCC2P18074 760 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 EPHB2P29323 1055 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 VCPP55072 806 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 NOMO1Q15155 1222 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 PIK3R6Q5UE93 754 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 ARL14EPQ8N8R7 260 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 ATXN2LQ8WWM7 1075 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 NKD2Q969F2 451 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 MRPL38Q96DV4 380 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 KLF16Q9BXK1 252 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 PRKD2Q9BZL6 878 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 FOXP3Q9BZS1 431 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 PRO3102Q9H379 93 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 KDM4CQ9H3R0 1056 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 GKN1Q9NS71 199 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 DNMT3BQ9UBC3 853 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 ZNF148Q9UQR1 794 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 DRG1Q9Y295 367 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 MFHAS1Q9Y4C4 1052 aa19.88■□□□□ 0.77
PDLIM2-204ENST00000397760 H0YHG0 523 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 DCLK1O15075 740 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 GJA1P17302 382 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 HDCP19113 662 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 EIF3EP60228 445 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 AUHQ13825 339 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 QPCTQ16769 361 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 MS4A13Q5J8X5 152 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 RELL1Q8IUW5 271 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 PLD4Q96BZ4 506 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 SLC22A12Q96S37 553 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 LRRC4CQ9HCJ2 640 aa19.87■□□□□ 0.77
PDLIM2-204ENST00000397760 MYO7AQ13402 2215 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 CCDC195A0A1B0GUA6 201 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 E9PAM4 449 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 NRG2O14511 850 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 MCF2LO15068 1137 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 FGF19O95750 216 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 OLFM2O95897 454 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 RHOP08100 348 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 HTR7P34969 479 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 NR2C2P49116 596 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 HARS2P49590 506 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 EPHA5P54756 1037 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 NRG1Q02297 640 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 GBE1Q04446 702 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 MTA1Q13330 715 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 ITIH4Q14624 930 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 OASLQ15646 514 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 MANEALQ5VSG8 457 aa19.86■□□□□ 0.77
PDLIM2-204ENST00000397760 RWDD4Q6NW29 188 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms