RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 MYL9P24844 172 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 TCF7P36402 384 aaPredicted RBP12.56□□□□□ -0.4
SMU1-201ENST00000397149 USP46P62068 366 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 CCL15Q16663 113 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 CBWD6Q4V339 395 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 NAIF1Q69YI7 327 aaPredicted RBP12.56□□□□□ -0.4
SMU1-201ENST00000397149 C16orf46Q6P387 395 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 ITFG1Q8TB96 612 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 RASSF5Q8WWW0 418 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 EDEM1Q92611 657 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 NKD1Q969G9 470 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 AGPAT5Q9NUQ2 364 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 CNTNAP2Q9UHC6 1331 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 FAM131BQ86XD5 332 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 PSMA8Q8TAA3 256 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 REPS1Q96D71 796 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 TFR2Q9UP52 801 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 URB2Q14146 1524 aaKnown RBP12.56□□□□□ -0.4
SMU1-201ENST00000397149 TM9SF1O15321 606 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 DGAT1O75907 488 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 VTNP04004 478 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 FMO4P31512 558 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 FASTKQ14296 549 aaKnown RBP12.56□□□□□ -0.4
SMU1-201ENST00000397149 ZNF563Q8TA94 476 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
SMU1-201ENST00000397149 PCDHB12Q9Y5F1 795 aa12.56□□□□□ -0.4
SMU1-201ENST00000397149 TFECO14948 347 aaPredicted RBP12.55□□□□□ -0.4
SMU1-201ENST00000397149 LDLRP01130 860 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 RB1P06400 928 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 PLEKP08567 350 aaPredicted RBP12.55□□□□□ -0.4
SMU1-201ENST00000397149 GFOD2Q3B7J2 385 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 CES3Q6UWW8 571 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 METTL6Q8TCB7 284 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 NUDT12Q9BQG2 462 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 AIF1LQ9BQI0 150 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 REEP1Q9H902 201 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 BARHL2Q9NY43 387 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 TRIM17Q9Y577 477 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 C2orf71A6NGG8 1288 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 FCGR1AP12314 374 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 DNASE1L1P49184 302 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 ADRM1Q16186 407 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 IQSEC1Q6DN90 963 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 DHFR2Q86XF0 187 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 ZDHHC6Q9H6R6 413 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 ATAD3AQ9NVI7 634 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 ING4Q9UNL4 249 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 GSAPA4D1B5 854 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 H0Y858 1186 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 NR3C2P08235 984 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 ACAT1P24752 427 aaKnown RBP12.55□□□□□ -0.4
SMU1-201ENST00000397149 MYBPC3Q14896 1274 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 IL27RAQ6UWB1 636 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 GRIN3AQ8TCU5 1115 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 GDPD5Q8WTR4 605 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 ITCHQ96J02 903 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 TARS2Q9BW92 718 aaKnown RBP12.55□□□□□ -0.4
SMU1-201ENST00000397149 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 GMEB1Q9Y692 573 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 CPA3P15088 417 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 GCLCP48506 637 aaPredicted RBP12.55□□□□□ -0.4
SMU1-201ENST00000397149 CBX3Q13185 183 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 IL18R1Q13478 541 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 SEPT12Q8IYM1 358 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 FBXO39Q8N4B4 442 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 MEIOBQ8N635 442 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 C3orf20Q8ND61 904 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 MAML3Q96JK9 1138 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 A0A0B4J269 797 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 ZBTB11O95625 1053 aaPredicted RBP12.55□□□□□ -0.4
SMU1-201ENST00000397149 CES1P23141 567 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 COILP38432 576 aaPredicted RBP12.55□□□□□ -0.4
SMU1-201ENST00000397149 LIFRP42702 1097 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 SLC18A3Q16572 532 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 PITRM1Q5JRX3 1037 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 DGLUCYQ7Z3D6 616 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 MARK4Q96L34 752 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 SPG21Q9NZD8 308 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 GRIP1Q9Y3R0 1128 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 AHCYL1O43865 530 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 POMCP01189 267 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 SKP1P63208 163 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 EFR3AQ14156 821 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 GLT6D1Q7Z4J2 308 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 SLC12A4Q9UP95 1085 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 PCDHB9Q9Y5E1 797 aa12.55□□□□□ -0.4
SMU1-201ENST00000397149 FAM135BQ49AJ0 1406 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 TBC1D3BA6NDS4 549 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 SIN3BO75182 1162 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 NQO1P15559 274 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 HOXC12P31275 282 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 HNRNPH1P31943 449 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ERICH5Q6P6B1 374 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ZZZ3Q8IYH5 903 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 PMEPA1Q969W9 287 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 CRELD1Q96HD1 420 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms