RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ETS1P14921 441 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PECAM1P16284 738 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 RPL19P84098 196 aaKnown RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 RBM43Q6ZSC3 357 aaKnown RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PIGKQ92643 395 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PLGRKTQ9HBL7 147 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF221Q9UK13 617 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 USP18Q9UMW8 372 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ATP5BP06576 529 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ME2P23368 584 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 PRKAA1Q13131 559 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ISLR2Q6UXK2 745 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 FAR1Q8WVX9 515 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 TIMMDC1Q9NPL8 285 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 LRRC4BQ9NT99 713 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 SEC22BO75396 215 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 CYP2A7P20853 494 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RPL9P32969 192 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MAPK9P45984 424 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 SKP1P63208 163 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 FMR1Q06787 632 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 GALNT3Q14435 633 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 GRB14Q14449 540 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 PKN1Q16512 942 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ATG4AQ8WYN0 398 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 PCDH12Q9NPG4 1184 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 DDIT4Q9NX09 232 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 VPS51Q9UID3 782 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 TNNI3P19429 210 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 HOXD10P28358 340 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RGS1Q08116 209 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 IL18Q14116 193 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MIIPQ5JXC2 388 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ATF7IP2Q5U623 682 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 EMC1Q8N766 993 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 UBA3Q8TBC4 463 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RASSF1Q9NS23 344 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 CCDC167Q9P0B6 97 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RPS6KA6Q9UK32 745 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 OGDHLQ9ULD0 1010 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RFX7Q2KHR2 1363 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RRN3P2A6NIE6 340 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RB1P06400 928 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 CYP2C8P10632 490 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ATF6P18850 670 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 LSM3P62310 102 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 RPL10AP62906 217 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 TMEM62Q0P6H9 643 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ALG11Q2TAA5 492 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 FNBP1LQ5T0N5 605 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MFSD7Q6UXD7 560 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 AGMOQ6ZNB7 445 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 CLEC17AQ6ZS10 378 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 KATNAL1Q9BW62 490 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 SAE1Q9UBE0 346 aaPredicted RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ACOT9Q9Y305 439 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MAP1BP46821 2468 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 GNB5O14775 395 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 SNAP91O60641 907 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 HLA-DRAP01903 254 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ARL3P36405 182 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 AMHR2Q16671 573 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MARK2Q7KZI7 788 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 C2orf69Q8N8R5 385 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MED28Q9H204 178 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 NT5MQ9NPB1 228 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 TRNAU1APQ9NX07 287 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MARK1Q9P0L2 795 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ARMCX1Q9P291 453 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 PLOD2O00469 737 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 C2CD2LO14523 706 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ARFIP1P53367 373 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 IL18R1Q13478 541 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 PIH1D2Q8WWB5 315 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 APOPT1Q96IL0 206 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ZMYM5Q9UJ78 669 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 CORO2BQ9UQ03 480 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 TDRKHQ9Y2W6 561 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 ATP10AO60312 1499 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 KRT33AO76009 404 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 MYBP10242 640 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 NOTUMQ6P988 496 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 POLNQ7Z5Q5 900 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 HTRA1Q92743 480 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 UNKQ9C0B0 810 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 CRISPLD1Q9H336 500 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 CDC42EP4Q9H3Q1 356 aaKnown RBP10.51□□□□□ -0.73
COL4A4-201ENST00000396625 SDK1Q7Z5N4 2213 aa10.51□□□□□ -0.73
COL4A4-201ENST00000396625 A0A0G2JPF8 293 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 HNRNPCL3B7ZW38 293 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 HNRNPCL4P0DMR1 293 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 FAM171BQ6P995 826 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 SLC26A11Q86WA9 606 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 ADSSL1Q8N142 457 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 CARNMT1Q8N4J0 409 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 AP1S3Q96PC3 154 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
COL4A4-201ENST00000396625 TBX22Q9Y458 520 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms