RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 GDF11O95390 407 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CRTAMO95727 393 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TOP3BO95985 862 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 KRT6AP02538 564 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 KRT6BP04259 564 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ITGAXP20702 1163 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 GARTP22102 1010 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CES1P23141 567 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 GRK4P32298 578 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 S100A5P33763 92 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 MPP2Q14168 576 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SNX17Q15036 470 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 OTUD3Q5T2D3 398 aaPredicted RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 UBAP2Q5T6F2 1119 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 C3orf62Q6ZUJ4 267 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 FBXW8Q8N3Y1 598 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 OLIG1Q8TAK6 271 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 AKAP1Q92667 903 aaKnown RBP eCLIP8.61□□□□□ -1.032e-8■■□□□ 12.5
NDE1-202ENST00000396355 E2F7Q96AV8 911 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CNDP1Q96KN2 507 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 REEP2Q9BRK0 252 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 EMILIN2Q9BXX0 1053 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 BEX2Q9BXY8 128 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 MAGEE1Q9HCI5 957 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 IQANK1A0A1B0GTG1 560 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TYW5A2RUC4 315 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 F5H423 210 aaPredicted RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 KIAA0391O15091 583 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 CLOCKO15516 846 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 MYBP10242 640 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 THRAP10827 490 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TFE3P19532 575 aaPredicted RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 ITIH1P19827 911 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 FMO4P31512 558 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TNFAIP2Q03169 654 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SLC9A5Q14940 896 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 PLCL1Q15111 1095 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 KIZQ2M2Z5 673 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 AKIRIN2Q53H80 203 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 IRF2BP2Q7Z5L9 587 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SLC22A16Q86VW1 577 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TPH2Q8IWU9 490 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SDCCAG3Q96C92 435 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 LRRC39Q96DD0 335 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 IDI2Q9BXS1 227 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 EPB41L1Q9H4G0 881 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ELOVL6Q9H5J4 265 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ERVK-5Q9HDB9 667 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 COLQQ9Y215 455 aaPredicted RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 KDM3AQ9Y4C1 1321 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 KRT87PA6NCN2 255 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TRIM64A6NGJ6 449 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TRIM64BA6NI03 449 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 C2CD2LO14523 706 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ZW10O43264 779 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 WDR47O94967 919 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 NUDT17P0C025 328 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 PCNAP12004 261 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CYP3A7P24462 503 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CASP4P49662 377 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 FCGRTP55899 365 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SLC13A2Q13183 592 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 VGLL4Q14135 290 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 RPS6KA2Q15349 733 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TTC27Q6P3X3 843 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 DCUN1D2Q6PH85 259 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 VSTM1Q6UX27 236 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ZNF571Q7Z3V5 609 aaPredicted RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 MMAAQ8IVH4 418 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 ZNF366Q8N895 744 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 C1orf131Q8NDD1 294 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 ATXN7L3BQ96GX2 97 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 PRR11Q96HE9 360 aaPredicted RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 PANX3Q96QZ0 392 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ZNF341Q9BYN7 854 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 EDEM3Q9BZQ6 932 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 HESX1Q9UBX0 185 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 FAM198AQ9UFP1 575 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ASTN1O14525 1302 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 RAB19A4D1S5 217 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 A8MUA0 341 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 ATP6V1G2-DDX39BF2Z307 99 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 TBX1O43435 398 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SCO1O75880 301 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 AKAP3O75969 853 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 PHKA2P46019 1235 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 YAP1P46937 504 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 PTENP60484 403 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 GK3PQ14409 553 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SUZ12Q15022 739 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 HDDC2Q7Z4H3 204 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 POLNQ7Z5Q5 900 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 UBE2J2Q8N2K1 259 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 PQLC1Q8N2U9 271 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 MCUQ8NE86 351 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 EXD1Q8NHP7 514 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms