RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FSCBQ5H9T9 825 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 Q6ZS52 159 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 KIAA0907Q7Z7F0 614 aaPredicted RBP19.77■□□□□ 0.76
HOXA9-202ENST00000396345 CPNE8Q86YQ8 564 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 LMLNQ96KR4 655 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 PJA2O43164 708 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 OXCT1P55809 520 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 MRPS21P82921 87 aaKnown RBP19.76■□□□□ 0.75
HOXA9-202ENST00000396345 CCZ1BP86790 482 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 CCZ1P86791 482 aaPredicted RBP19.76■□□□□ 0.75
HOXA9-202ENST00000396345 SEMA3BQ13214 749 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 SMTNL2Q2TAL5 461 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 C2orf27AQ580R0 203 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 EMC10Q5UCC4 262 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 TFAP2DQ7Z6R9 452 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 AHI1Q8N157 1196 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 DTWD2Q8NBA8 298 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 RPLP0P6Q8NHW5 317 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 USP33Q8TEY7 942 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 HSPH1Q92598 858 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 FAM122AQ96E09 287 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 PDLIM2Q96JY6 352 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 KCTD15Q96SI1 283 aaPredicted RBP19.76■□□□□ 0.75
HOXA9-202ENST00000396345 IER2Q9BTL4 223 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 LACRTQ9GZZ8 138 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 STARD13Q9Y3M8 1113 aa19.76■□□□□ 0.75
HOXA9-202ENST00000396345 KMT2EQ8IZD2 1858 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 ANTXRLA6NF34 631 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 BTNL10A8MVZ5 291 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 TIMM44O43615 452 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 PTMAP06454 111 aaKnown RBP19.75■□□□□ 0.75
HOXA9-202ENST00000396345 RARAP10276 462 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 RHOQP17081 205 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 TIE1P35590 1138 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 PLA2G5P39877 138 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 KIR2DL1P43626 348 aaPredicted RBP19.75■□□□□ 0.75
HOXA9-202ENST00000396345 MTAPQ13126 283 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 SLC12A1Q13621 1099 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 GAS6Q14393 721 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 KCNT1Q5JUK3 1230 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 TMEM215Q68D42 235 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 TXNRD3NBQ6F5E7 133 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 CXorf57Q6NSI4 855 aaKnown RBP19.75■□□□□ 0.75
HOXA9-202ENST00000396345 ADIPOR2Q86V24 386 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 KCNV2Q8TDN2 545 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 UCMAQ8WVF2 138 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 TEKT4Q8WW24 435 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 CALR3Q96L12 384 aaKnown RBP19.75■□□□□ 0.75
HOXA9-202ENST00000396345 CIPCQ9C0C6 399 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 RETREG1Q9H6L5 497 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 ELOVL2Q9NXB9 296 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 NEU3Q9UQ49 428 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 TBC1D30Q9Y2I9 924 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 ARIH1Q9Y4X5 557 aaPredicted RBP19.75■□□□□ 0.75
HOXA9-202ENST00000396345 ADGRG1Q9Y653 693 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 DUSP10Q9Y6W6 482 aa19.75■□□□□ 0.75
HOXA9-202ENST00000396345 CHURC1-FNTBB4DL54 471 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 EEF2KO00418 725 aaKnown RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 ATG13O75143 517 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 MOCS3O95396 460 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 RHOCP08134 193 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 POLR2EP19388 210 aaKnown RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 EPHB2P29323 1055 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 OR1E1P30953 314 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 HTR7P34969 479 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 GJC1P36383 396 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 CSKP41240 450 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 SLC1A1P43005 524 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 NAP1L1P55209 391 aaKnown RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 TAS2R40P59535 323 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 TPI1P60174 286 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 KIF5AQ12840 1032 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 DMC1Q14565 340 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 EIF4HQ15056 248 aaKnown RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 FUT11Q495W5 492 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 PPP6R3Q5H9R7 873 aaPredicted RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 PITRM1Q5JRX3 1037 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 C6orf118Q5T5N4 469 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 MBLAC2Q68D91 279 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 PKN3Q6P5Z2 889 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 SETD3Q86TU7 594 aaPredicted RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 SPEM1Q8N4L4 309 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 ZNF513Q8N8E2 541 aaPredicted RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 PPP1R9BQ96SB3 815 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 TMEM248Q9NWD8 314 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 SPATA6Q9NWH7 488 aaPredicted RBP19.74■□□□□ 0.75
HOXA9-202ENST00000396345 ZNF212Q9UDV6 495 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 SALL4Q9UJQ4 1053 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 HCN2Q9UL51 889 aa19.74■□□□□ 0.75
HOXA9-202ENST00000396345 MYO18AQ92614 2054 aaKnown RBP19.73■□□□□ 0.75
HOXA9-202ENST00000396345 BUB1O43683 1085 aa19.73■□□□□ 0.75
HOXA9-202ENST00000396345 BUB1BO60566 1050 aaPredicted RBP19.73■□□□□ 0.75
HOXA9-202ENST00000396345 KLF8O95600 359 aaPredicted RBP19.73■□□□□ 0.75
HOXA9-202ENST00000396345 CHRM1P11229 460 aaPredicted RBP19.73■□□□□ 0.75
HOXA9-202ENST00000396345 MZF1P28698 734 aaPredicted RBP19.73■□□□□ 0.75
HOXA9-202ENST00000396345 HOXC13P31276 330 aa19.73■□□□□ 0.75
HOXA9-202ENST00000396345 ZNF135P52742 658 aaPredicted RBP19.73■□□□□ 0.75
HOXA9-202ENST00000396345 E2F5Q15329 346 aa19.73■□□□□ 0.75
HOXA9-202ENST00000396345 DPYSL2Q16555 572 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms