RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SLC8A1P32418 973 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 SGSHP51688 502 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 BPIFB4P59827 614 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 FAM193AP78312 1265 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 ELAVL3Q14576 367 aaKnown RBP16.92■□□□□ 0.3
DDR1-229ENST00000396342 EXOC3L4Q17RC7 722 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 KIF19Q2TAC6 998 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 ACCSLQ4AC99 568 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 CCDC157Q569K6 752 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 TMEM110Q86TL2 294 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 MMAAQ8IVH4 418 aaKnown RBP16.92■□□□□ 0.3
DDR1-229ENST00000396342 PNPLA1Q8N8W4 532 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 MSANTD4Q8NCY6 345 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 CCDC114Q96M63 670 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 RPRD1AQ96P16 312 aaPredicted RBP16.92■□□□□ 0.3
DDR1-229ENST00000396342 CCDC86Q9H6F5 360 aaKnown RBP16.92■□□□□ 0.3
DDR1-229ENST00000396342 COX16Q9P0S2 106 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 DACH1Q9UI36 760 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 CNTN6Q9UQ52 1028 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 FNDC3AQ9Y2H6 1198 aaKnown RBP16.92■□□□□ 0.3
DDR1-229ENST00000396342 SNX11Q9Y5W9 270 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.91■□□□□ 0.3
DDR1-229ENST00000396342 A0A1B0GVM2 712 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 TCAF2A6NFQ2 919 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 PES1O00541 588 aaKnown RBP16.91■□□□□ 0.3
DDR1-229ENST00000396342 TNFSF14O43557 240 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 PSMD8P48556 350 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 ARRB1P49407 418 aaPredicted RBP16.91■□□□□ 0.3
DDR1-229ENST00000396342 ZNF177Q13360 481 aaPredicted RBP16.91■□□□□ 0.3
DDR1-229ENST00000396342 PDCLQ13371 301 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 ARID5BQ14865 1188 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 NADSYN1Q6IA69 706 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 OR14C36Q8NHC7 312 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 SLC39A13Q96H72 371 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 PPP1R13BQ96KQ4 1090 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 KREMEN1Q96MU8 473 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 CRACR2AQ9BSW2 395 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 IL21RQ9HBE5 538 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 GDF3Q9NR23 364 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 ASNSD1Q9NWL6 643 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 RRN3Q9NYV6 651 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 APEX2Q9UBZ4 518 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 FTSJ1Q9UET6 329 aa16.91■□□□□ 0.3
DDR1-229ENST00000396342 MYO18AQ92614 2054 aaKnown RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3DA0A087WVF3 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3IA0A087WXS9 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3EA0A087X179 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3KA0A087X1G2 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 A0A1W2PP55 124 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 FAM221BA6H8Z2 402 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3FA6NER0 549 aaPredicted RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 SRRM3A6NNA2 597 aaPredicted RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3LB9A6J9 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 C1QTNF3-AMACRE9PGA6 284 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 MID1O15344 667 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 CALCAP01258 141 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 ITGAVP06756 1048 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3HP0C7X1 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 CDK4P11802 303 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 GOT1P17174 413 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 NUDT1P36639 197 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 RPL34P49207 117 aaKnown RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 GALCP54803 685 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 NME3Q13232 169 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 HS1BP3Q53T59 392 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 SYPL2Q5VXT5 272 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3GQ6DHY5 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 OR6B2Q6IFH4 312 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3CQ6IPX1 549 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 NCEH1Q6PIU2 408 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 TRIM65Q6PJ69 517 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 LRRC31Q6UY01 552 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 C11orf57Q6ZUT1 292 aaPredicted RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 PRPF39Q86UA1 669 aaKnown RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 TBC1D3Q8IZP1 549 aaPredicted RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 WFDC5Q8TCV5 224 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 OR8D1Q8WZ84 308 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 PRICKLE1Q96MT3 831 aaPredicted RBP16.9■□□□□ 0.3
DDR1-229ENST00000396342 SPAG5Q96R06 1193 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 ZSWIM1Q9BR11 485 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 KIAA1468Q9P260 1216 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 STAP1Q9ULZ2 295 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 PLXND1Q9Y4D7 1925 aa16.9■□□□□ 0.3
DDR1-229ENST00000396342 A0A1W2PPC4 97 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 GTPBP10A4D1E9 387 aaKnown RBP16.89■□□□□ 0.29
DDR1-229ENST00000396342 TTC34A8MYJ7 566 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 VILLO15195 856 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 PAPSS1O43252 624 aaPredicted RBP16.89■□□□□ 0.29
DDR1-229ENST00000396342 PCDHGA12O60330 932 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 PDGFRAP16234 1089 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 CCR5P51681 352 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 UBE2HP62256 183 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 KRT83P78385 493 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 ACBD5Q5T8D3 534 aaPredicted RBP16.89■□□□□ 0.29
DDR1-229ENST00000396342 ZDHHC17Q8IUH5 632 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
DDR1-229ENST00000396342 OXR1Q8N573 874 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 MLKLQ8NB16 471 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 SERAC1Q96JX3 654 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 NEUROG2Q9H2A3 272 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms