RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 GAGE10A6NGK3 116 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 TSPAN4O14817 238 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 FYB1O15117 783 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 LDLRAD4O15165 306 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 TMCC2O75069 709 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 ALDOCP09972 364 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 NPSP0C0P6 89 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 EBLN1P0CF75 366 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 CD72P21854 359 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 MLH1P40692 756 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 TXKP42681 527 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 MTNR1AP48039 350 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 COPB1P53618 953 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 CLNS1AP54105 237 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 NAP1L1P55209 391 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 EEFSECP57772 596 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 RPS3AP61247 264 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 ARHGAP8P85298 464 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 CFHR3Q02985 330 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 DCTN2Q13561 401 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 ALKBH1Q13686 389 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 EIF4A2Q14240 407 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 GXYLT1Q4G148 440 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 ZNF667Q5HYK9 610 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 FNDC7Q5VTL7 733 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 TMEM88Q6PEY1 159 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 KCNV1Q6PIU1 500 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 CCDC129Q6ZRS4 1044 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 BCDIN3DQ7Z5W3 292 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 BRSK2Q8IWQ3 736 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 ADSSL1Q8N142 457 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 VPS52Q8N1B4 723 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 C1orf131Q8NDD1 294 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 HAS1Q92839 578 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 PLEKHG4BQ96PX9 1271 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 CD180Q99467 661 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 NUDT16L1Q9BRJ7 211 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 PCDHB16Q9NRJ7 776 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 SYBUQ9NX95 663 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 SMPD4Q9NXE4 827 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 PPP1R14DQ9NXH3 145 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 ALKBH4Q9NXW9 302 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 GAR1Q9NY12 217 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 CNOT11Q9UKZ1 510 aaKnown RBP5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 SUFUQ9UMX1 484 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 TEX22C9J3V5 150 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 SYN3O14994 580 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 PER2O15055 1255 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 TIPRLO75663 272 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 RFPL3SP0C7P2 107 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 ACADMP11310 421 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 CYP4B1P13584 511 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 RRM1P23921 792 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 ARF3P61204 181 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 CYP4F2P78329 520 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 ARF1P84077 181 aaKnown RBP5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 DMWDQ09019 674 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 MPP3Q13368 585 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 BYSLQ13895 437 aaKnown RBP5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 SEMA3AQ14563 771 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 AP5B1Q2VPB7 878 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 SLC9B1Q4ZJI4 515 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 PLAC9Q5JTB6 97 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 DENND2CQ68D51 928 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 ANKRD16Q6P6B7 361 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 ENOSF1Q7L5Y1 443 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 MDGA2Q7Z553 956 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 GALNT7Q86SF2 657 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 CNTROBQ8N137 903 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 PLD5Q8N7P1 536 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 SRFBP1Q8NEF9 429 aaKnown RBP5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 RAB40AQ8WXH6 277 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 CIPCQ9C0C6 399 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 EPHX3Q9H6B9 360 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 KCND2Q9NZV8 630 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 HCN3Q9P1Z3 774 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 OSGIN2Q9Y236 505 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 PKP3Q9Y446 797 aa5.46□□□□□ -1.54
HMGB1P10-201ENST00000395823 CNTN5O94779 1100 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 TUBB4AP04350 444 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 HSPA1AP0DMV8 641 aaKnown RBP5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 HSPA1BP0DMV9 641 aaKnown RBP5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 PKMP14618 531 aaKnown RBP5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 ZNF20P17024 532 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 TM4SF1P30408 202 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 PTGS2P35354 604 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 HOXD12P35452 270 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 MPLP40238 635 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 GRIA3P42263 894 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 ZNF84P51523 738 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 RPS6KA3P51812 740 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 UFM1P61960 85 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 PLP2Q04941 152 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 GOLGA8FQ08AF8 430 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 CNGA3Q16281 694 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 CCNG2Q16589 344 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 TBC1D25Q3MII6 688 aa5.45□□□□□ -1.54
HMGB1P10-201ENST00000395823 GJB7Q6PEY0 223 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms