RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 COILP38432 576 aaPredicted RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 SEC13P55735 322 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 PPWD1Q96BP3 646 aaKnown RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 STRCQ7RTU9 1775 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 TIMM44O43615 452 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 RASSF9O75901 435 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 SNRPAP09012 282 aaKnown RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 EDNRBP24530 442 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 IL17AQ16552 155 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 PPP4R4Q6NUP7 873 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 ANKS1BQ7Z6G8 1248 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 PHOSPHO2Q8TCD6 241 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 ZNHIT2Q9UHR6 403 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 COL2A1P02458 1487 aaPredicted RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 CATP04040 527 aaKnown RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 WARSP23381 471 aaKnown RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 PSMD8P48556 350 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 UBE3AQ05086 875 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 TP53BP2Q13625 1128 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 SGO1Q5FBB7 561 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 FAM71AQ8IYT1 594 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 RNF39Q9H2S5 420 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 AGO1Q9UL18 857 aaKnown RBP13.13□□□□□ -0.31
CAST-206ENST00000395812 PLAAQ9Y263 795 aa13.13□□□□□ -0.31
CAST-206ENST00000395812 PAGE1O75459 146 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 ASLP04424 464 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 AIF1P55008 147 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 HPCAP84074 193 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 CFAP52Q8N1V2 620 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 C4orf32Q8N8J7 132 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 SEMA3CQ99985 751 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 APPL1Q9UKG1 709 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 CCDC160A6NGH7 325 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 RNF103O00237 685 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 KLRC4O43908 158 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 CDH16O75309 829 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 LRRC6Q86X45 466 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 BEND7Q8N7W2 519 aaPredicted RBP13.12□□□□□ -0.31
CAST-206ENST00000395812 PLD4Q96BZ4 506 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 PARD6BQ9BYG5 372 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 ORC6Q9Y5N6 252 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 CHD4Q14839 1912 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 MYADML2A6NDP7 307 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 C5orf58C9J3I9 102 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 AGRPO00253 132 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
CAST-206ENST00000395812 DIAPH2O60879 1101 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 PTPN7P35236 360 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
CAST-206ENST00000395812 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
CAST-206ENST00000395812 STK40Q8N2I9 435 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 MS4A14Q96JA4 679 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 TRIM51Q9BSJ1 452 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 ASPSCR1Q9BZE9 553 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 UPF3AQ9H1J1 476 aaKnown RBP13.12□□□□□ -0.31
CAST-206ENST00000395812 PRDM12Q9H4Q4 367 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 LAMTOR5O43504 91 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
CAST-206ENST00000395812 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAST-206ENST00000395812 TNNI3P19429 210 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 MAGEA4P43358 317 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 TCEA2Q15560 299 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 PHLDB3Q6NSJ2 640 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 C11orf63Q6NUN7 778 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 SLC27A6Q9Y2P4 619 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
CAST-206ENST00000395812 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
CAST-206ENST00000395812 MSI1O43347 362 aaKnown RBP13.11□□□□□ -0.31
CAST-206ENST00000395812 ERCC2P18074 760 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 TACR2P21452 398 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 FOXD4Q12950 439 aaPredicted RBP13.11□□□□□ -0.31
CAST-206ENST00000395812 GPR17Q13304 367 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 CCNG2Q16589 344 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 EOGTQ5NDL2 527 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 LRRC55Q6ZSA7 311 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 DNAJC16Q9Y2G8 782 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 H3BMM5 538 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 ZNF623O75123 536 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 RARAP10276 462 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 SLC25A52Q3SY17 297 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 C6orf10Q5SRN2 563 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 DQX1Q8TE96 717 aaKnown RBP13.11□□□□□ -0.31
CAST-206ENST00000395812 ATG4AQ8WYN0 398 aa13.11□□□□□ -0.31
CAST-206ENST00000395812 FAM136AQ96C01 138 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms