RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 C1orf228Q6PIY5 440 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 CENPUQ71F23 418 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 ZNF771Q7L3S4 317 aaPredicted RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 ZC3H18Q86VM9 953 aaKnown RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 EPS8L3Q8TE67 593 aaKnown RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 ZNF334Q9HCZ1 680 aaPredicted RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 COMMD8Q9NX08 183 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 IL37Q9NZH6 218 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 GMIPQ9P107 970 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 C2orf16Q68DN1 1984 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 VCANP13611 3396 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 FAM92AA1XBS5 289 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 HACD1B0YJ81 288 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 H3BRJ5 948 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 TMEM63AO94886 807 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 MYL4P12829 197 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 TSHRP16473 764 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 GOT1P17174 413 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 GABRR2P28476 465 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 MDH1P40925 334 aaKnown RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 MMP13P45452 471 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 CXCR3P49682 368 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 GBE1Q04446 702 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 SLC10A2Q12908 348 aaPredicted RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 RASA2Q15283 850 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 PABPC1LQ4VXU2 614 aaKnown RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 ANKRD22Q5VYY1 191 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 PDZD4Q76G19 769 aaPredicted RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 TMC8Q8IU68 726 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 RNF139Q8WU17 664 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 FRMD8Q9BZ67 464 aaPredicted RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 CENPHQ9H3R5 247 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 CNOT10Q9H9A5 744 aaKnown RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 DTLQ9NZJ0 730 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 CDH22Q9UJ99 828 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 H7C0C1 242 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 RGS16O15492 202 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 GCATO75600 419 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 ZNF189O75820 626 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 IVLP07476 585 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 ATP5OP48047 213 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 NTHL1P78549 312 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 COL19A1Q14993 1142 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 PAFAH1B3Q15102 231 aaKnown RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 EFHC2Q5JST6 749 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 CES5AQ6NT32 575 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 BZW1Q7L1Q6 419 aaKnown RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 MON1AQ86VX9 555 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 TDRPQ86YL5 185 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 PYROXD2Q8N2H3 581 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 RIBC1Q8N443 379 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 C9orf72Q96LT7 481 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 MAGEB5Q9BZ81 275 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 PPCSQ9HAB8 311 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 SAYSD1Q9NPB0 183 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 TLR8Q9NR97 1041 aaKnown RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 DNAJC17Q9NVM6 304 aaKnown RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 FETUBQ9UGM5 382 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 HEY1Q9Y5J3 304 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 A0A087WUV0 522 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 A0A1W2PQH9 124 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 A0A1W2PRU2 124 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 H3BQ06 376 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 I6L893 689 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 CAPN9O14815 690 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 DCLK1O15075 740 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 POU2F2P09086 479 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 RBL1P28749 1068 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 PGFP49763 221 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 ARL4CP56559 192 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 YWHAGP61981 247 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 DNAJC21Q5F1R6 531 aaKnown RBP15.55■□□□□ 0.08
SCAF11-204ENST00000395454 GAREM2Q75VX8 874 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 GPR149Q86SP6 731 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 PDZD8Q8NEN9 1154 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 GCNAQ96QF7 691 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 LRRC3Q9BY71 257 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 ATXN3LQ9H3M9 355 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 IL21Q9HBE4 155 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 TMEM51Q9NW97 253 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 TRPM5Q9NZQ8 1165 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 RAD54BQ9Y620 910 aa15.55■□□□□ 0.08
SCAF11-204ENST00000395454 C5orf60A6NFR6 353 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 KCNN4O15554 427 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 CDH16O75309 829 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 NCAM1P13591 858 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 GJA1P17302 382 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 KCNA5P22460 613 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 CCR2P41597 374 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 ATP1A2P50993 1020 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 GNGT1P63211 74 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 FASTKD3Q14CZ7 662 aaKnown RBP15.54■□□□□ 0.08
SCAF11-204ENST00000395454 PRKD1Q15139 912 aaPredicted RBP15.54■□□□□ 0.08
SCAF11-204ENST00000395454 SLC5A9Q2M3M2 681 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 BSPRYQ5W0U4 402 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 LRRC31Q6UY01 552 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 LEMD2Q8NC56 503 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 OVCA2Q8WZ82 227 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 EDEM1Q92611 657 aa15.54■□□□□ 0.08
SCAF11-204ENST00000395454 NOTCH4Q99466 2003 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms