RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 RWDD4Q6NW29 188 aaKnown RBP25.24■■□□□ 1.63
CTF1-202ENST00000395019 TRMT10CQ7L0Y3 403 aaKnown RBP25.24■■□□□ 1.63
CTF1-202ENST00000395019 DNAJB7Q7Z6W7 309 aaPredicted RBP25.24■■□□□ 1.63
CTF1-202ENST00000395019 RELL1Q8IUW5 271 aa25.24■■□□□ 1.63
CTF1-202ENST00000395019 NPWQ8N729 165 aa25.24■■□□□ 1.63
CTF1-202ENST00000395019 SEMA4AQ9H3S1 761 aa25.24■■□□□ 1.63
CTF1-202ENST00000395019 UXTQ9UBK9 157 aaPredicted RBP25.24■■□□□ 1.63
CTF1-202ENST00000395019 E9PAM4 449 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 H3BQF6 201 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 RFPL2O75678 378 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 SYF2O95926 243 aaKnown RBP25.23■■□□□ 1.63
CTF1-202ENST00000395019 C8AP07357 584 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 MX2P20592 715 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 TUBP50607 506 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 GALNT2Q10471 571 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 C14orf80Q86SX3 495 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 PSMG2Q969U7 264 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 GAS2L1Q99501 681 aaPredicted RBP25.23■■□□□ 1.63
CTF1-202ENST00000395019 SH3GL2Q99962 352 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 FERMT1Q9BQL6 677 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 NFS1Q9Y697 457 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 OBSL1O75147 1896 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 MS4A13Q5J8X5 152 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 ITIH5Q86UX2 942 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 TP53INP2Q8IXH6 220 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 ZNF683Q8IZ20 524 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 NETO2Q8NC67 525 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 CCDC110Q8TBZ0 833 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 PWWP2AQ96N64 755 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 KLC2Q9H0B6 622 aa25.23■■□□□ 1.63
CTF1-202ENST00000395019 NOTCH4Q99466 2003 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 OPA1O60313 960 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 BASP1P80723 227 aaKnown RBP25.22■■□□□ 1.63
CTF1-202ENST00000395019 AP1B1Q10567 949 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 ANKRD22Q5VYY1 191 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 NUGGCQ68CJ6 796 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 LZTR1Q8N653 840 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 CCNYQ8ND76 341 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 ZBTB9Q96C00 473 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 HDAC11Q96DB2 347 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 P2RY11Q96G91 374 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 PHACTR1Q9C0D0 580 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 CDC42EP4Q9H3Q1 356 aaKnown RBP25.22■■□□□ 1.63
CTF1-202ENST00000395019 PPARGC1AQ9UBK2 798 aaKnown RBP25.22■■□□□ 1.63
CTF1-202ENST00000395019 ASB3Q9Y575 518 aa25.22■■□□□ 1.63
CTF1-202ENST00000395019 BRWD1Q9NSI6 2320 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 A0A0A0MRY4 1105 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 WASH4PA8MWX3 477 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 CHADO15335 359 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 NUDT17P0C025 328 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 OAS2P29728 719 aaKnown RBP25.21■■□□□ 1.63
CTF1-202ENST00000395019 PPIDQ08752 370 aaKnown RBP25.21■■□□□ 1.63
CTF1-202ENST00000395019 DENND2CQ68D51 928 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 C12orf76Q8N812 135 aaPredicted RBP25.21■■□□□ 1.63
CTF1-202ENST00000395019 SPATA13Q96N96 652 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 RBM15Q96T37 977 aaKnown RBP eCLIP25.21■■□□□ 1.63
CTF1-202ENST00000395019 CDCA3Q99618 268 aaPredicted RBP25.21■■□□□ 1.63
CTF1-202ENST00000395019 RAB6BQ9NRW1 208 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 COL6A3P12111 3177 aa25.21■■□□□ 1.63
CTF1-202ENST00000395019 RIPK2O43353 540 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 COCHO43405 550 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 RRP9O43818 475 aaKnown RBP25.2■■□□□ 1.62
CTF1-202ENST00000395019 STK10O94804 968 aaKnown RBP25.2■■□□□ 1.62
CTF1-202ENST00000395019 HMBSP08397 361 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 MAGEA6P43360 314 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 AUHQ13825 339 aaKnown RBP25.2■■□□□ 1.62
CTF1-202ENST00000395019 KCNJ11Q14654 390 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 CCDC149Q6ZUS6 474 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 TAB3Q8N5C8 712 aaPredicted RBP25.2■■□□□ 1.62
CTF1-202ENST00000395019 EFHBQ8N7U6 833 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 NACA2Q9H009 215 aa25.2■■□□□ 1.62
CTF1-202ENST00000395019 DNAJC17Q9NVM6 304 aaKnown RBP25.2■■□□□ 1.62
CTF1-202ENST00000395019 DENND4CQ5VZ89 1909 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 CCL16O15467 120 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 GARSP41250 739 aaKnown RBP25.19■■□□□ 1.62
CTF1-202ENST00000395019 EIF3BP55884 814 aaKnown RBP25.19■■□□□ 1.62
CTF1-202ENST00000395019 DLX2Q07687 328 aaPredicted RBP25.19■■□□□ 1.62
CTF1-202ENST00000395019 LRRC31Q6UY01 552 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 RTL3Q8N8U3 475 aaKnown RBP25.19■■□□□ 1.62
CTF1-202ENST00000395019 PPP2R3CQ969Q6 453 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 PRMT1Q99873 361 aaKnown RBP25.19■■□□□ 1.62
CTF1-202ENST00000395019 IGLV3-10A0A075B6K4 115 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 TCRBV7S3A2A0A539 114 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 OPHN1O60890 802 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 TMEM63AO94886 807 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 C1RP00736 705 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 OAS1P00973 400 aaKnown RBP25.19■■□□□ 1.62
CTF1-202ENST00000395019 COG7P83436 770 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 ZNF33AQ06730 810 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 WASHC5Q12768 1159 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 SLC29A2Q14542 456 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 ANKRD20A2Q5SQ80 823 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 ANKRD20A1Q5TYW2 823 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 ANKRD20A3Q5VUR7 823 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 TMEM150AQ86TG1 271 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 ETNK1Q9HBU6 452 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 VANGL2Q9ULK5 521 aa25.19■■□□□ 1.62
CTF1-202ENST00000395019 ANAPC1Q9H1A4 1944 aa25.18■■□□□ 1.62
CTF1-202ENST00000395019 RNF103O00237 685 aa25.18■■□□□ 1.62
CTF1-202ENST00000395019 MTSS1O43312 755 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms