RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ME1P48163 572 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 RPS24P62847 133 aaKnown RBP16.41■□□□□ 0.22
SNCA-205ENST00000394991 ENPEPQ07075 957 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 BST2Q10589 180 aaKnown RBP16.41■□□□□ 0.22
SNCA-205ENST00000394991 SFSWAPQ12872 951 aaKnown RBP16.41■□□□□ 0.22
SNCA-205ENST00000394991 FSCBQ5H9T9 825 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 KRT39Q6A163 491 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 SND1Q7KZF4 910 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNCA-205ENST00000394991 OXR1Q8N573 874 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 HJURPQ8NCD3 748 aaPredicted RBP16.41■□□□□ 0.22
SNCA-205ENST00000394991 OR14C36Q8NHC7 312 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 UBA3Q8TBC4 463 aa16.41■□□□□ 0.22
SNCA-205ENST00000394991 IPO9Q96P70 1041 aaKnown RBP16.41■□□□□ 0.22
SNCA-205ENST00000394991 SPTA1P02549 2419 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 TARSL2A2RTX5 802 aaKnown RBP16.4■□□□□ 0.22
SNCA-205ENST00000394991 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 GOT1P17174 413 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 GTF2H1P32780 548 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 SLC11A2P49281 568 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 MXI1P50539 228 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 METAP1P53582 386 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 MCCD1P59942 119 aaPredicted RBP16.4■□□□□ 0.22
SNCA-205ENST00000394991 KCNH2Q12809 1159 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 PITRM1Q5JRX3 1037 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 NAPEPLDQ6IQ20 393 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 KDM7AQ6ZMT4 941 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 SIX6OS1Q8N1H7 587 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 SCML4Q8N228 414 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 STK40Q8N2I9 435 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 CARNMT1Q8N4J0 409 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 ZNF557Q8N988 423 aaPredicted RBP16.4■□□□□ 0.22
SNCA-205ENST00000394991 KDM1BQ8NB78 822 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 FBXL13Q8NEE6 735 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 KCTD13Q8WZ19 329 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 EEF2KMTQ96G04 330 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 LGMNQ99538 433 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 SEMA4CQ9C0C4 833 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 CNGB3Q9NQW8 809 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 RAB20Q9NX57 234 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 PCDHB1Q9Y5F3 818 aa16.4■□□□□ 0.22
SNCA-205ENST00000394991 EDDM13A0A1B0GTR0 161 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 TRIM38O00635 465 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 SDC3O75056 442 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
SNCA-205ENST00000394991 LCP1P13796 627 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 DRD3P35462 400 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 PSMC2P35998 433 aaKnown RBP16.39■□□□□ 0.21
SNCA-205ENST00000394991 PKDCCQ504Y2 493 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 SLC45A4Q5BKX6 768 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 NUGGCQ68CJ6 796 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 MFSD2AQ8NA29 543 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 NAF1Q96HR8 494 aaKnown RBP16.39■□□□□ 0.21
SNCA-205ENST00000394991 FCRL2Q96LA5 508 aaPredicted RBP16.39■□□□□ 0.21
SNCA-205ENST00000394991 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
SNCA-205ENST00000394991 ARHGAP20Q9P2F6 1191 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 HESX1Q9UBX0 185 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
SNCA-205ENST00000394991 O00370 1275 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 PIK3R2O00459 728 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 SIGLEC6O43699 453 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 ADH1BP00325 375 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 MT-CO3P00414 261 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 CD19P15391 556 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 VAV1P15498 845 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 C5AR1P21730 350 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 MZF1P28698 734 aaPredicted RBP16.38■□□□□ 0.21
SNCA-205ENST00000394991 RGS7P49802 495 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 STK19P49842 368 aaPredicted RBP16.38■□□□□ 0.21
SNCA-205ENST00000394991 TBX4P57082 545 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 KIF26BQ2KJY2 2108 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 ZCWPW2Q504Y3 356 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 TAF1BQ53T94 588 aaPredicted RBP16.38■□□□□ 0.21
SNCA-205ENST00000394991 APCDD1Q8J025 514 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 CFAP52Q8N1V2 620 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 CLEC4CQ8WTT0 213 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 AZIN2Q96A70 460 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 FAM131CQ96AQ9 280 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 HIC2Q96JB3 615 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 CAAP1Q9H8G2 361 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 CPNE5Q9HCH3 593 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 PIEZO2Q9H5I5 2752 aa16.38■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3DA0A087WVF3 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3IA0A087WXS9 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3EA0A087X179 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3KA0A087X1G2 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3FA6NER0 549 aaPredicted RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3LB9A6J9 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 PYCARD-AS1I3L0S3 204 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 LUC7L3O95232 432 aaKnown RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 TBC1D3HP0C7X1 549 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 SETSIPP0DME0 302 aa16.37■□□□□ 0.21
SNCA-205ENST00000394991 MAT2AP31153 395 aaKnown RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 PCBP4P57723 403 aaKnown RBP16.37■□□□□ 0.21
SNCA-205ENST00000394991 ADAM9Q13443 819 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms