RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 RPLP2P05387 115 aaKnown RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 CD68P34810 354 aaPredicted RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 ZBTB17Q13105 803 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 IRGQQ8WZA9 623 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 DPF3Q92784 378 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 LRRC37BQ96QE4 947 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 DMAP1Q9NPF5 467 aaPredicted RBP14.32□□□□□ -0.12
SNCA-204ENST00000394989 PSAT1Q9Y617 370 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 CASP8AP2Q9UKL3 1982 aa14.32□□□□□ -0.12
SNCA-204ENST00000394989 SHROOM3Q8TF72 1996 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 USP12O75317 370 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 KRT38O76015 456 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 UNC5CO95185 931 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 IGLV3-25P01717 112 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 CST5P28325 142 aaPredicted RBP14.31□□□□□ -0.12
SNCA-204ENST00000394989 ZSCAN18Q8TBC5 510 aaPredicted RBP14.31□□□□□ -0.12
SNCA-204ENST00000394989 DQX1Q8TE96 717 aaKnown RBP14.31□□□□□ -0.12
SNCA-204ENST00000394989 TSSK1BQ9BXA7 367 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 ARHGEF3Q9NR81 526 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 MKS1Q9NXB0 559 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 RNF186Q9NXI6 227 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 RRN3Q9NYV6 651 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.31□□□□□ -0.12
SNCA-204ENST00000394989 FRMPD3Q5JV73 1810 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 CFAP73A6NFT4 308 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 F9P00740 461 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 NQO1P15559 274 aaKnown RBP14.31□□□□□ -0.12
SNCA-204ENST00000394989 ITGA7Q13683 1181 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 SMAD1Q15797 465 aaKnown RBP14.31□□□□□ -0.12
SNCA-204ENST00000394989 ARL13BQ3SXY8 428 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 FAM26DQ5JW98 314 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 LGSNQ5TDP6 509 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 AP1ARQ63HQ0 302 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 OVOS1Q6IE37 1185 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 RTN4RL1Q86UN2 441 aaPredicted RBP14.31□□□□□ -0.12
SNCA-204ENST00000394989 METTL23Q86XA0 190 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 MTBPQ96DY7 904 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 AGAP3Q96P47 875 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 KCNK13Q9HB14 408 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 PCMTD2Q9NV79 361 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 DCTN4Q9UJW0 460 aa14.31□□□□□ -0.12
SNCA-204ENST00000394989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 H0Y3Z8 333 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 C2CD2LO14523 706 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 ZBTB24O43167 697 aaPredicted RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 PGAM1P18669 254 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 IFRD2Q12894 506 aaPredicted RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 ARTNQ5T4W7 220 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 CES3Q6UWW8 571 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 MARK2Q7KZI7 788 aaKnown RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 OR52K1Q8NGK4 314 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 HDAC11Q96DB2 347 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 FERMT1Q9BQL6 677 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 KLHL8Q9P2G9 620 aaPredicted RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 ABT1Q9ULW3 272 aaKnown RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 TTC3P53804 2025 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 ALDOAP04075 364 aaKnown RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 KRT16P08779 473 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 T-ENOLP0DO92 83 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 EPHB2P29323 1055 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 GARSP41250 739 aaKnown RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 GALNT2Q10471 571 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 KCTD11Q693B1 232 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 NLRP9Q7RTR0 991 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 SCML4Q8N228 414 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 SUSD3Q96L08 255 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 RAD54BQ9Y620 910 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 CALRP27797 417 aaKnown RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 SKIV2L2P42285 1042 aaKnown RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 MBTPS1Q14703 1052 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 ZNF280BQ86YH2 543 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 NDUFAF2Q8N183 169 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 APBB2Q92870 758 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 FCRL3Q96P31 734 aaPredicted RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 NOP53Q9NZM5 478 aaKnown RBP14.3□□□□□ -0.12
SNCA-204ENST00000394989 DSEQ9UL01 958 aa14.3□□□□□ -0.12
SNCA-204ENST00000394989 TNFRSF10BO14763 440 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 NCAM2O15394 837 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 DCTN3O75935 186 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 AP2A1O95782 977 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 OR4Q2P0C623 313 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 TARSP26639 723 aaKnown RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 IRX1P78414 480 aaPredicted RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 FYB2Q5VWT5 728 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 TRAF7Q6Q0C0 670 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 PACS1Q6VY07 963 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 TIFABQ6ZNK6 161 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 EPAS1Q99814 870 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 MLPHQ9BV36 600 aaPredicted RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 IQCGQ9H095 443 aaKnown RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 KLF11O14901 512 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 INPPL1O15357 1258 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 DDHD2O94830 711 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 DLDP09622 509 aaKnown RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 CRHR1P34998 444 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 SERPINB9P50453 376 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 SLC5A3P53794 718 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 SETDB1Q15047 1291 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 CTC1Q2NKJ3 1217 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms