RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 MZF1P28698 734 aaPredicted RBP20.51■□□□□ 0.87
SNCA-203ENST00000394986 PXNP49023 591 aaPredicted RBP20.51■□□□□ 0.87
SNCA-203ENST00000394986 CDH4P55283 916 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 CA9Q16790 459 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 PITRM1Q5JRX3 1037 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 MANEALQ5VSG8 457 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 TMEM92Q6UXU6 159 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 RAD9BQ6WBX8 426 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 CYP4V2Q6ZWL3 525 aaPredicted RBP20.51■□□□□ 0.87
SNCA-203ENST00000394986 TMTC1Q8IUR5 882 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 TMEM139Q8IV31 216 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 CCDC170Q8IYT3 715 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 CHPFQ8IZ52 775 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 APCDD1Q8J025 514 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 ZNF557Q8N988 423 aaPredicted RBP20.51■□□□□ 0.87
SNCA-203ENST00000394986 PRRX2Q99811 253 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 SNRNP25Q9BV90 132 aaKnown RBP20.51■□□□□ 0.87
SNCA-203ENST00000394986 KIAA1522Q9P206 1035 aaPredicted RBP20.51■□□□□ 0.87
SNCA-203ENST00000394986 UVRAGQ9P2Y5 699 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 AP4E1Q9UPM8 1137 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 SLC8A2Q9UPR5 921 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 ATG2BQ96BY7 2078 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 IL1R2P27930 398 aa20.5■□□□□ 0.87
SNCA-203ENST00000394986 CYLC1P35663 651 aaPredicted RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 MAGEA1P43355 309 aa20.5■□□□□ 0.87
SNCA-203ENST00000394986 NRG1Q02297 640 aaPredicted RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 ZNF177Q13360 481 aaPredicted RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 EIF4HQ15056 248 aaKnown RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 ACBD5Q5T8D3 534 aaPredicted RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 RWDD4Q6NW29 188 aaKnown RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 ZYG11BQ9C0D3 744 aa20.5■□□□□ 0.87
SNCA-203ENST00000394986 FAM86C1Q9NVL1 165 aa20.5■□□□□ 0.87
SNCA-203ENST00000394986 THAP10Q9P2Z0 257 aaPredicted RBP20.5■□□□□ 0.87
SNCA-203ENST00000394986 IP6K2Q9UHH9 426 aa20.5■□□□□ 0.87
SNCA-203ENST00000394986 FBXO4Q9UKT5 387 aa20.5■□□□□ 0.87
SNCA-203ENST00000394986 RAD54BQ9Y620 910 aa20.5■□□□□ 0.87
SNCA-203ENST00000394986 CACNA1IQ9P0X4 2223 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 MYO1FO00160 1098 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 PRPSAP2O60256 369 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 PAPSS2O95340 614 aaPredicted RBP20.49■□□□□ 0.87
SNCA-203ENST00000394986 LCA5LO95447 670 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 NTSR1P30989 418 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 IL12RB1P42701 662 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 CTSOP43234 321 aaPredicted RBP20.49■□□□□ 0.87
SNCA-203ENST00000394986 PIGHQ14442 188 aaPredicted RBP20.49■□□□□ 0.87
SNCA-203ENST00000394986 ZNF234Q14588 700 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 PLEKHG6Q3KR16 790 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 HEATR6Q6AI08 1181 aaKnown RBP20.49■□□□□ 0.87
SNCA-203ENST00000394986 TXNRD3NBQ6F5E7 133 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 NIPA2Q8N8Q9 360 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 SLC35G2Q8TBE7 412 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 UCMAQ8WVF2 138 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 BAG1Q99933 345 aaPredicted RBP20.49■□□□□ 0.87
SNCA-203ENST00000394986 KCNH6Q9H252 994 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 DHX35Q9H5Z1 703 aaKnown RBP20.49■□□□□ 0.87
SNCA-203ENST00000394986 PPARGC1AQ9UBK2 798 aaKnown RBP20.49■□□□□ 0.87
SNCA-203ENST00000394986 ZNF212Q9UDV6 495 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 USP18Q9UMW8 372 aa20.49■□□□□ 0.87
SNCA-203ENST00000394986 TMEM110-MUSTN1A8MSY1 372 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 CREB3O43889 395 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 NDUFA10O95299 355 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 POLR2EP19388 210 aaKnown RBP20.48■□□□□ 0.87
SNCA-203ENST00000394986 PCK1P35558 622 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 PTPN5P54829 565 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 AIF1P55008 147 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 CRY1Q16526 586 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 PTPRNQ16849 979 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 SMTNL2Q2TAL5 461 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 KCNT1Q5JUK3 1230 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 EOGTQ5NDL2 527 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 ERMARDQ5T6L9 678 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 RNF219Q5W0B1 726 aaPredicted RBP20.48■□□□□ 0.87
SNCA-203ENST00000394986 TRMT11Q7Z4G4 463 aaKnown RBP20.48■□□□□ 0.87
SNCA-203ENST00000394986 KCNV2Q8TDN2 545 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 TBC1D31Q96DN5 1066 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 KCTD15Q96SI1 283 aaPredicted RBP20.48■□□□□ 0.87
SNCA-203ENST00000394986 ZWILCHQ9H900 591 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 NDFIP2Q9NV92 336 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 TBC1D30Q9Y2I9 924 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 PCDHA13Q9Y5I0 950 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 EPN1Q9Y6I3 576 aaPredicted RBP20.48■□□□□ 0.87
SNCA-203ENST00000394986 STON1Q9Y6Q2 735 aa20.48■□□□□ 0.87
SNCA-203ENST00000394986 GOLGA6L6A8MZA4 724 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 EIF3CLB5ME19 914 aaKnown RBP20.47■□□□□ 0.87
SNCA-203ENST00000394986 RHOCP08134 193 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 HLA-EP13747 358 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 HOXB2P14652 356 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 L1CAMP32004 1257 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 SEMA3BQ13214 749 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 ACAP1Q15027 740 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 SPA17Q15506 151 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 HSF5Q4G112 596 aaPredicted RBP20.47■□□□□ 0.87
SNCA-203ENST00000394986 KIAA1211LQ6NV74 962 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 NLRP14Q86W24 1093 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 ZNF366Q8N895 744 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 ACRBPQ8NEB7 543 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 TSTD1Q8NFU3 115 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 RFFLQ8WZ73 363 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 TTC17Q96AE7 1141 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms