RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PCYT2Q99447 389 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 WDCPQ9H6R7 721 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 ACOT9Q9Y305 439 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 PSAT1Q9Y617 370 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 TAF6P49848 677 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 AQP4P55087 323 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 LAMC2Q13753 1193 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 CSHL1Q14406 222 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 KYAT1Q16773 422 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 MARK2Q7KZI7 788 aaKnown RBP16.5■□□□□ 0.23
PCDH1-203ENST00000394536 ZNF781Q8N8C0 355 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 URGCPQ8TCY9 931 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 CCDC68Q9H2F9 335 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 DTLQ9NZJ0 730 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 CCDC167Q9P0B6 97 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 CDH22Q9UJ99 828 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 ARHGAP10A1A4S6 786 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 BCLAF3A2AJT9 711 aaKnown RBP16.5■□□□□ 0.23
PCDH1-203ENST00000394536 F8W8V4 182 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 TIMM44O43615 452 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 MFSD11O43934 449 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 C2P06681 752 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 KPNA2P52292 529 aaKnown RBP16.5■□□□□ 0.23
PCDH1-203ENST00000394536 ZNF484Q5JVG2 852 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 APLFQ8IW19 511 aaPredicted RBP16.5■□□□□ 0.23
PCDH1-203ENST00000394536 ADGRF2Q8IZF7 708 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 SNRNP27Q8WVK2 155 aaKnown RBP16.5■□□□□ 0.23
PCDH1-203ENST00000394536 NRG4Q8WWG1 115 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 APBB2Q92870 758 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 RCN3Q96D15 328 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 AGAP2Q99490 1192 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 USP29Q9HBJ7 922 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 TUBGCP4Q9UGJ1 667 aa16.5■□□□□ 0.23
PCDH1-203ENST00000394536 RECQL4O94761 1208 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 STBD1O95210 358 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 HSPA8P11142 646 aaKnown RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 VCLP18206 1134 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 MPSTP25325 297 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 ADCYAP1R1P41586 468 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 PGGT1BP53609 377 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 HDAC4P56524 1084 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 CLDN10P78369 228 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 FOLH1Q04609 750 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 AGKQ53H12 422 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 FAM156AQ8NDB6 213 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 BHLHE22Q8NFJ8 381 aaPredicted RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 PABPC5Q96DU9 382 aaKnown RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 KANSL3Q9P2N6 904 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 THEGQ9P2T0 379 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 E7ESA3 106 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 SLC25A27O95847 323 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 LGALS2P05162 132 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 FAM200BP0CF97 657 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 ADORA2AP29274 412 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 MYLK4Q86YV6 388 aaPredicted RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 NUP93Q8N1F7 819 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 PHTF2Q8N3S3 785 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 KCTD15Q96SI1 283 aaPredicted RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 ZNF180Q9UJW8 692 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 UBQLN1Q9UMX0 589 aaKnown RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 PPEF2O14830 753 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 MYL3P08590 195 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 PAMP19021 973 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 TSPAN8P19075 237 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 PTPN7P35236 360 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 KLF10Q13118 480 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 CTBP1Q13363 440 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 GRTP1Q5TC63 336 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 PQLC3Q8N755 202 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 B4GALNT2Q8NHY0 566 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 CPNE1Q99829 537 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 ACE2Q9BYF1 805 aaPredicted RBP16.49■□□□□ 0.23
PCDH1-203ENST00000394536 NOD1Q9Y239 953 aa16.49■□□□□ 0.23
PCDH1-203ENST00000394536 SUPT3HO75486 399 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 SUPT7LO94864 414 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 AMHP03971 560 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 CTSHP09668 335 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 ERCC2P18074 760 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 IDH3AP50213 366 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 SLC26A2P50443 739 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 TTC30AQ86WT1 665 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 KCTD4Q8WVF5 259 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 KCNK13Q9HB14 408 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 PFDN4Q9NQP4 134 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 CHRAC1Q9NRG0 131 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 ARHGEF38Q9NXL2 777 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 EURLQ9NYK6 297 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.48■□□□□ 0.23
PCDH1-203ENST00000394536 NUDT5Q9UKK9 219 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 POMPQ9Y244 141 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
PCDH1-203ENST00000394536 GRIA4P48058 902 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 ARPP19P56211 112 aa16.48■□□□□ 0.23
PCDH1-203ENST00000394536 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
PCDH1-203ENST00000394536 CCDC153Q494R4 210 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms