RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GMPRP36959 345 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 SARNPP82979 210 aaKnown RBP15.46■□□□□ 0.06
GPC3-202ENST00000394299 SLC18A2Q05940 514 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 GALNT2Q10471 571 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 OVGP1Q12889 678 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 RSPO2Q6UXX9 243 aaPredicted RBP15.46■□□□□ 0.06
GPC3-202ENST00000394299 FITM2Q8N6M3 262 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 ZSCAN18Q8TBC5 510 aaPredicted RBP15.46■□□□□ 0.06
GPC3-202ENST00000394299 TTC17Q96AE7 1141 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 ZNF419Q96HQ0 510 aaPredicted RBP15.46■□□□□ 0.06
GPC3-202ENST00000394299 SCLYQ96I15 445 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 FCRL3Q96P31 734 aaPredicted RBP15.46■□□□□ 0.06
GPC3-202ENST00000394299 TSEN34Q9BSV6 310 aaKnown RBP15.46■□□□□ 0.06
GPC3-202ENST00000394299 MLPHQ9BV36 600 aaPredicted RBP15.46■□□□□ 0.06
GPC3-202ENST00000394299 KDM4CQ9H3R0 1056 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 IGSF9Q9P2J2 1179 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 SNRPAP09012 282 aaKnown RBP15.45■□□□□ 0.06
GPC3-202ENST00000394299 ERVK-10P10266 1014 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 SELPP16109 830 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 NEK3P51956 506 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 PDZD4Q76G19 769 aaPredicted RBP15.45■□□□□ 0.06
GPC3-202ENST00000394299 TMEM173Q86WV6 379 aaPredicted RBP15.45■□□□□ 0.06
GPC3-202ENST00000394299 CNTD1Q8N815 330 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 PPM1EQ8WY54 764 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 CRISPLD1Q9H336 500 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 PRDM16Q9HAZ2 1276 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 SSU72Q9NP77 194 aaKnown RBP15.45■□□□□ 0.06
GPC3-202ENST00000394299 ARHGEF38Q9NXL2 777 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 BPTFQ12830 3046 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 SHROOM3Q8TF72 1996 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 LAMA3Q16787 3333 aa15.45■□□□□ 0.06
GPC3-202ENST00000394299 CCDC78A2IDD5 438 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 EDF1O60869 148 aaKnown RBP15.44■□□□□ 0.06
GPC3-202ENST00000394299 ETV4P43268 484 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 CTXN3Q4LDR2 81 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 LACTB2Q53H82 288 aaPredicted RBP15.44■□□□□ 0.06
GPC3-202ENST00000394299 TEX44Q53QW1 395 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 CERCAMQ5T4B2 595 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 OTOAQ7RTW8 1153 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 TAS1R1Q7RTX1 841 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 SCML4Q8N228 414 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 ANKLE1Q8NAG6 615 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 SRPK1Q96SB4 655 aaKnown RBP15.44■□□□□ 0.06
GPC3-202ENST00000394299 FERMT1Q9BQL6 677 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 MECRQ9BV79 373 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 ARL2BPQ9Y2Y0 163 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 H0YHG0 523 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 KRT37O76014 449 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 VEGFBP49765 207 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 CRYMQ14894 314 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 ABI1Q8IZP0 508 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 SPATA22Q8NHS9 363 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 HDAC11Q96DB2 347 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 APOPT1Q96IL0 206 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 CASD1Q96PB1 797 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 OSBPL2Q9H1P3 480 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 TMEM161AQ9NX61 479 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 GMIPQ9P107 970 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 PCDHB7Q9Y5E2 793 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 PTPRDP23468 1912 aa15.44■□□□□ 0.06
GPC3-202ENST00000394299 ATP9BO43861 1147 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 MLNP12872 115 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 BGNP21810 368 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 CCR1P32246 355 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 CDK16Q00536 496 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 ARHGAP12Q8IWW6 846 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 DNAAF3Q8N9W5 541 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 DPF3Q92784 378 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 SLC39A8Q9C0K1 460 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 UNC93B1Q9H1C4 597 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 EIF2B3Q9NR50 452 aaKnown RBP15.43■□□□□ 0.06
GPC3-202ENST00000394299 PCMTD2Q9NV79 361 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 ADAM28Q9UKQ2 775 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 HS3ST4Q9Y661 456 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 FRMPD3Q5JV73 1810 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 ARHGAP42A6NI28 874 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 COPEO14579 308 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 TM9SF1O15321 606 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 SLC11A1P49279 550 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 TUBP50607 506 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 CDK7P50613 346 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 ATN1P54259 1190 aaPredicted RBP15.43■□□□□ 0.06
GPC3-202ENST00000394299 CCL23P55773 120 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 IRX4P78413 519 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 STEAP4Q687X5 459 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 FAM126BQ8IXS8 530 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 DCP1BQ8IZD4 617 aaKnown RBP15.43■□□□□ 0.06
GPC3-202ENST00000394299 NUP93Q8N1F7 819 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 ALKBH8Q96BT7 664 aaKnown RBP15.43■□□□□ 0.06
GPC3-202ENST00000394299 SMOC2Q9H3U7 446 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 MANSC1Q9H8J5 431 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 HAUS2Q9NVX0 235 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 MARCH5Q9NX47 278 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 KANSL3Q9P2N6 904 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 ZNF180Q9UJW8 692 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 RPS6KL1Q9Y6S9 549 aa15.43■□□□□ 0.06
GPC3-202ENST00000394299 E2F8A0AVK6 867 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 PQBP1O60828 265 aaKnown RBP15.42■□□□□ 0.06
GPC3-202ENST00000394299 ALDH1A2O94788 518 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 AP2A1O95782 977 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms