RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 WFIKKN2Q8TEU8 576 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 UCMAQ8WVF2 138 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 RUBCNQ92622 972 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 PGAP3Q96FM1 320 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 RPL10LQ96L21 214 aaKnown RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MRGPRX1Q96LB2 322 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 TRIM7Q9C029 511 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MKRN2Q9H000 416 aaKnown RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 DUSP15Q9H1R2 295 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 SEMA4AQ9H3S1 761 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 PARD6AQ9NPB6 346 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 RRN3Q9NYV6 651 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MPP6Q9NZW5 540 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MYO1AQ9UBC5 1043 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MBD1Q9UIS9 605 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 RAB23Q9ULC3 237 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 CAPN11Q9UMQ6 739 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 CYP8B1Q9UNU6 501 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MUC22E2RYF6 1773 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 ATG2BQ96BY7 2078 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 ITIH6Q6UXX5 1313 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ATXN2Q99700 1313 aaKnown RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCDC163A0A0D9SF12 145 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 A0A1B0GVM2 712 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 TCAF2A6NFQ2 919 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 SIGLEC16A6NMB1 481 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 TTC34A8MYJ7 566 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 E9PAM4 449 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM72CH0Y354 149 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 SYNCRIPO60506 623 aaKnown RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ENDOD1O94919 500 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 F9P00740 461 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 FTLP02792 175 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 DLDP09622 509 aaKnown RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 VAV1P15498 845 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 POLR2EP19388 210 aaKnown RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 CNR2P34972 360 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 PTPN9P43378 593 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 COPAP53621 1224 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZBED6P86452 979 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 MAMLD1Q13495 774 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ENPP2Q13822 863 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 STARD3Q14849 445 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 PLEKHG6Q3KR16 790 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 PLK5Q496M5 336 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 USP39Q53GS9 565 aaKnown RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM72AQ5TYM5 149 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 DAB2IPQ5VWQ8 1189 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 RNF219Q5W0B1 726 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 LAIR1Q6GTX8 287 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM72DQ6L9T8 149 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 SCYL2Q6P3W7 929 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 DCUN1D2Q6PH85 259 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM72BQ86X60 149 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCDC117Q8IWD4 279 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 TMEFF1Q8IYR6 380 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 PYROXD2Q8N2H3 581 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF653Q96CK0 615 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 MYO19Q96H55 970 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 MRGPRX3Q96LB0 322 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 NUP58Q9BVL2 599 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 EDEM3Q9BZQ6 932 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 RBSNQ9H1K0 784 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ARRDC1-AS1Q9H2J1 176 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 TMEM245Q9H330 911 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 GPATCH2LQ9NWQ4 482 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 KIAA1522Q9P206 1035 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ARHGAP20Q9P2F6 1191 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 CNOT8Q9UFF9 292 aaKnown RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ADAMTS1Q9UHI8 967 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLCO3A1Q9UIG8 710 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 GMEB2Q9UKD1 530 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 USP18Q9UMW8 372 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 PLA2G4CQ9UP65 541 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 ERVW-1Q9UQF0 538 aa7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 LUC7L2Q9Y383 392 aaKnown RBP7.9□□□□□ -1.14
HMGB3P1-201ENST00000393368 DMXL1Q9Y485 3027 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 GPR179Q6PRD1 2367 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 A0A087X0T9 212 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 A0A0D9SEW6 157 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 CBFA2T2O43439 604 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 TIMM44O43615 452 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 SNAP91O60641 907 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 SIN3BO75182 1162 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 SERPING1P05155 500 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ATP5BP06576 529 aaKnown RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 FAM228BP0C875 321 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 TGM1P22735 817 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 GLDCP23378 1020 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ADRA1BP35368 520 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 P2RY2P41231 377 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 PTGER3P43115 390 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 DHPSP49366 369 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF143P52747 638 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 GFPT1Q06210 699 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF177Q13360 481 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms