RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ZNF177Q13360 481 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-203ENST00000391855 CAMK2GQ13555 558 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-203ENST00000391855 CSRP2Q16527 193 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 PTPRNQ16849 979 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 RNF219Q5W0B1 726 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-203ENST00000391855 TRNP1Q6NT89 227 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 KIAA1324Q6UXG2 1013 aaKnown RBP13.06□□□□□ -0.32
GGPS1-203ENST00000391855 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 MCOLN2Q8IZK6 566 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 OR2T3Q8NH03 318 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 CYB5D2Q8WUJ1 264 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 SORCS1Q8WY21 1168 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 TRIM11Q96F44 468 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 SIK2Q9H0K1 926 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 HAUS4Q9H6D7 363 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 SEMA4GQ9NTN9 838 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 IFNKQ9P0W0 207 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
GGPS1-203ENST00000391855 IGLV3-10A0A075B6K4 115 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 DCLK1O15075 740 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 AP5Z1O43299 807 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 SDHBP21912 280 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 BCKDHBP21953 392 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 NNMTP40261 264 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 PLK1P53350 603 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ZBED6P86452 979 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ATP11AP98196 1134 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 NRG1Q02297 640 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ZBTB16Q05516 673 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 NFKBIBQ15653 356 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 SETD3Q86TU7 594 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 FAM131BQ86XD5 332 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 KIAA2013Q8IYS2 634 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 JOSD2Q8TAC2 188 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 CENPIQ92674 756 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 PRCCQ92733 491 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 IGSF8Q969P0 613 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 NTAN1Q96AB6 310 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 SIPA1Q96FS4 1042 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 RETREG1Q9H6L5 497 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 INTS6Q9UL03 887 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 TBC1D30Q9Y2I9 924 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 RIF1Q5UIP0 2472 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 TCRBV5S1A1TA0A578 114 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 FAM170AA1A519 330 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 BCLAF3A2AJT9 711 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 DRGXA6NNA5 263 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 TGM1P22735 817 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 OXTRP30559 389 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 RFC1P35251 1148 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 MPLP40238 635 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ZNF143P52747 638 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 AIF1P55008 147 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ECT2LQ008S8 904 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 SPEM2Q0P670 501 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 SFSWAPQ12872 951 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 TRIM14Q14142 442 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 CDO1Q16878 200 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 HNRNPA1L2Q32P51 320 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 CCDC14Q49A88 953 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 TDRD12Q587J7 1177 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 C6orf118Q5T5N4 469 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 E4F1Q66K89 784 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 CXorf57Q6NSI4 855 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 DCUN1D2Q6PH85 259 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 WDR59Q6PJI9 974 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ZNF783Q6ZMS7 281 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 CYP2U1Q7Z449 544 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 TMPRSS6Q8IU80 811 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ZNF683Q8IZ20 524 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 FAM172AQ8WUF8 416 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 RLN3Q8WXF3 142 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 VPS45Q9NRW7 570 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 PARVAQ9NVD7 372 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 USP36Q9P275 1121 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
GGPS1-203ENST00000391855 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
GGPS1-203ENST00000391855 GPR179Q6PRD1 2367 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 EDDM13A0A1B0GTR0 161 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 TARSL2A2RTX5 802 aaKnown RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 E9PAM4 449 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 I6L893 689 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 IGLV3-19P01714 112 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 SERPING1P05155 500 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 RHOCP08134 193 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ZNF806P0C7X5 589 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 MYBL1P10243 752 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ACADMP11310 421 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 HLA-EP13747 358 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 RRM1P23921 792 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ADRA1BP35368 520 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 HOXD12P35452 270 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 GGCXP38435 758 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms