RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 C7orf57Q8NEG2 295 aa3.75□□□□□ -1.81
TRAV40-201ENST00000390467 NEUROG1Q92886 237 aa3.75□□□□□ -1.81
TRAV40-201ENST00000390467 ZNF419Q96HQ0 510 aaPredicted RBP3.75□□□□□ -1.81
TRAV40-201ENST00000390467 CCDC138Q96M89 665 aa3.75□□□□□ -1.81
TRAV40-201ENST00000390467 ADAD1Q96M93 576 aaKnown RBP3.75□□□□□ -1.81
TRAV40-201ENST00000390467 FRMD8Q9BZ67 464 aaPredicted RBP3.75□□□□□ -1.81
TRAV40-201ENST00000390467 SFXN1Q9H9B4 322 aa3.75□□□□□ -1.81
TRAV40-201ENST00000390467 SLC12A4Q9UP95 1085 aa3.75□□□□□ -1.81
TRAV40-201ENST00000390467 CEP83Q9Y592 693 aa3.75□□□□□ -1.81
TRAV40-201ENST00000390467 CKAP5Q14008 2032 aa3.75□□□□□ -1.81
TRAV40-201ENST00000390467 RPS10-NUDT3A0A1W2PQS6 291 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 C3orf70A6NLC5 250 aaPredicted RBP3.74□□□□□ -1.81
TRAV40-201ENST00000390467 MSI1O43347 362 aaKnown RBP3.74□□□□□ -1.81
TRAV40-201ENST00000390467 CYP3A4P08684 503 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 ABCB4P21439 1286 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 GRK5P34947 590 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 RFX2P48378 723 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 NEK3P51956 506 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 PMPCAQ10713 525 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 GALNT3Q14435 633 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 WASHC2DQ5SRD0 308 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 ZNF324BQ6AW86 544 aaPredicted RBP3.74□□□□□ -1.81
TRAV40-201ENST00000390467 IL31Q6EBC2 164 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 RINT1Q6NUQ1 792 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 DLK2Q6UY11 383 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 TRILQ7L0X0 811 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 REXO5Q96IC2 774 aaKnown RBP3.74□□□□□ -1.81
TRAV40-201ENST00000390467 SF3B5Q9BWJ5 86 aaKnown RBP3.74□□□□□ -1.81
TRAV40-201ENST00000390467 CCDC134Q9H6E4 229 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 TASP1Q9H6P5 420 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 ZNF304Q9HCX3 659 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 TBC1D14Q9P2M4 693 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 LZTS1Q9Y250 596 aa3.74□□□□□ -1.81
TRAV40-201ENST00000390467 COPG1Q9Y678 874 aaKnown RBP3.74□□□□□ -1.81
TRAV40-201ENST00000390467 TCF20Q9UGU0 1960 aaKnown RBP3.73□□□□□ -1.81
TRAV40-201ENST00000390467 CYP3A7-CYP3A51PA0A087WV96 503 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 SLC38A8A6NNN8 435 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 BECN2A8MW95 431 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 MCIDASD6RGH6 385 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 PRSS44E7EML9 344 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 DNPH1O43598 174 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 ACAA1P09110 424 aaPredicted RBP3.73□□□□□ -1.81
TRAV40-201ENST00000390467 CYP3A7P24462 503 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 RFX5P48382 616 aaPredicted RBP3.73□□□□□ -1.81
TRAV40-201ENST00000390467 ZBTB16Q05516 673 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 SF3A3Q12874 501 aaKnown RBP eCLIP3.73□□□□□ -1.81
TRAV40-201ENST00000390467 TRAF1Q13077 416 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 BTBD16Q32M84 506 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 C10orf76Q5T2E6 689 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 TMEM88Q6PEY1 159 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 PARM1Q6UWI2 310 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 C18orf65Q6ZTR6 163 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 SPATA2LQ8IUW3 424 aaPredicted RBP3.73□□□□□ -1.81
TRAV40-201ENST00000390467 PRR26Q8N8Z3 221 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 OR1N1Q8NGS0 311 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 MUL1Q969V5 352 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 SGCZQ96LD1 299 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 PRPF18Q99633 342 aaKnown RBP3.73□□□□□ -1.81
TRAV40-201ENST00000390467 ISCUQ9H1K1 167 aa3.73□□□□□ -1.81
TRAV40-201ENST00000390467 TP63Q9H3D4 680 aaPredicted RBP3.73□□□□□ -1.81
TRAV40-201ENST00000390467 A0A1B0GVT2 93 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 FAM90A18PA6NE21 464 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 FAM90A16PA6NEW6 464 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 FAM90A9PA6NNJ1 464 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 FAM90A5PA8MXJ8 464 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 KCNJ18B7U540 433 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 TNFRSF6BO95407 300 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 LCATP04180 440 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 FAM90A15PP0C7V4 464 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 FAM90A14PP0C7W9 464 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 AK2P54819 239 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 POLE2P56282 527 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 RNASELQ05823 741 aaKnown RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 LTBQ06643 244 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 ASIC2Q16515 512 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 INO80DQ53TQ3 878 aaPredicted RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 Q5PR19 223 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 KIAA1324Q6UXG2 1013 aaKnown RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 Q6ZTK2 550 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 C11orf96Q7Z7L8 435 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 RBM23Q86U06 439 aaKnown RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 DCP1BQ8IZD4 617 aaKnown RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 IQCF1Q8N6M8 205 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 TMEM217Q8N7C4 229 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 ENGASEQ8NFI3 743 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 STYXQ8WUJ0 223 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 WDR60Q8WVS4 1066 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 SORBS1Q9BX66 1292 aaKnown RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 PLAC1Q9HBJ0 212 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 KRCC1Q9NPI7 259 aaPredicted RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 PNRC2Q9NPJ4 139 aaKnown RBP3.72□□□□□ -1.81
TRAV40-201ENST00000390467 CDC23Q9UJX2 597 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 MYO6Q9UM54 1294 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 TNFSF13BQ9Y275 285 aa3.72□□□□□ -1.81
TRAV40-201ENST00000390467 GAGE12JA6NER3 117 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 INAFM1C9JVW0 142 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 I6L893 689 aaPredicted RBP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 RGS14O43566 566 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 KLKB1P03952 638 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms