RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 SUV39H1O43463 412 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 RTN2O75298 545 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 VNN1O95497 513 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 ZBED1O96006 694 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 HOXD13P35453 343 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 CDKN3Q16667 212 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 ARL13BQ3SXY8 428 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 ACCSLQ4AC99 568 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 C9orf64Q5T6V5 341 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 DSG4Q86SJ6 1040 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 UNC45BQ8IWX7 931 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 FAM217AQ8IXS0 508 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 AADATQ8N5Z0 425 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 PARD3BQ8TEW8 1205 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 ARRDC3Q96B67 414 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 GRAMD1AQ96CP6 724 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 TWNKQ96RR1 684 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 DDX50Q9BQ39 737 aaKnown RBP10.09□□□□□ -0.79
TRAV18-201ENST00000390446 DUSP23Q9BVJ7 150 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 USP29Q9HBJ7 922 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 DNAJC28Q9NX36 388 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 CGNQ9P2M7 1197 aaKnown RBP10.09□□□□□ -0.79
TRAV18-201ENST00000390446 CYTH4Q9UIA0 394 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
TRAV18-201ENST00000390446 CA5BQ9Y2D0 317 aa10.09□□□□□ -0.79
TRAV18-201ENST00000390446 HECTD1Q9ULT8 2610 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 MSI1O43347 362 aaKnown RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 BNIP3LO60238 219 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 PPFIA2O75334 1257 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 LATS1O95835 1130 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 SRPRAP08240 638 aaKnown RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 FAM87AP0C7U9 286 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 AFMP43652 599 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 ASPAP45381 313 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 SGSHP51688 502 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 ECT2LQ008S8 904 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 TLE1Q04724 770 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 KCNMA1Q12791 1236 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 CLN3Q13286 438 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 ZNF542PQ5EBM4 170 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 FAM46CQ5VWP2 391 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 CRTC1Q6UUV9 634 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 RBM44Q6ZP01 1051 aaKnown RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 KIAA0907Q7Z7F0 614 aaPredicted RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 PIGZQ86VD9 579 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 SIX6OS1Q8N1H7 587 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 HJURPQ8NCD3 748 aaPredicted RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 WDR36Q8NI36 951 aaKnown RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 FIBINQ8TAL6 211 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 GOLGA5Q8TBA6 731 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 WFDC5Q8TCV5 224 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 NDRG1Q92597 394 aaKnown RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 KLK6Q92876 244 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 TTC17Q96AE7 1141 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 SGF29Q96ES7 293 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 RPL10LQ96L21 214 aaKnown RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 FAM129BQ96TA1 746 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 ULBP1Q9BZM6 244 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 TNMDQ9H2S6 317 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 MMRN2Q9H8L6 949 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 CYP3A43Q9HB55 503 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 SLC39A2Q9NP94 309 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 KLHL11Q9NVR0 708 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 NLGN3Q9NZ94 848 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 IPO11Q9UI26 975 aaKnown RBP10.08□□□□□ -0.8
TRAV18-201ENST00000390446 SLCO3A1Q9UIG8 710 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 COL6A6A6NMZ7 2263 aa10.08□□□□□ -0.8
TRAV18-201ENST00000390446 TP53BP1Q12888 1972 aaPredicted RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 IRAK2O43187 625 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 LATO43561 262 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 PIAS2O75928 621 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 ASS1P00966 412 aaKnown RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 HLA-DRAP01903 254 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 C7P10643 843 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 TGM2P21980 687 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 MZF1P28698 734 aaPredicted RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 AKT2P31751 481 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 CTSOP43234 321 aaPredicted RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 NUMBP49757 651 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 DLG4P78352 724 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 ZNF177Q13360 481 aaPredicted RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 ELAVL3Q14576 367 aaKnown RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 KNOP1Q1ED39 458 aaKnown RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 LINC00303Q3SY05 128 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 PITRM1Q5JRX3 1037 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 MPP7Q5T2T1 576 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 PIK3R6Q5UE93 754 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 BSPRYQ5W0U4 402 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 CEP135Q66GS9 1140 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 NUGGCQ68CJ6 796 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 EPM2AIP1Q7L775 607 aaPredicted RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 EFL1Q7Z2Z2 1120 aaKnown RBP10.07□□□□□ -0.8
TRAV18-201ENST00000390446 KDM1BQ8NB78 822 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 TPCN2Q8NHX9 752 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 PLEKHO2Q8TD55 490 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 OR8D1Q8WZ84 308 aa10.07□□□□□ -0.8
TRAV18-201ENST00000390446 RNF34Q969K3 372 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms