RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 NFS1Q9Y697 457 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 RNF103O00237 685 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 CCL16O15467 120 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 GCATO75600 419 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 LRG1P02750 347 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 F11P03951 625 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 CYP4F8P98187 520 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SLMAPQ14BN4 828 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ZSCAN26Q16670 478 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ANKRD20A2Q5SQ80 823 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 FNBP1LQ5T0N5 605 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ANKRD20A1Q5TYW2 823 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ANKRD20A3Q5VUR7 823 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 TXNDC8Q6A555 127 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 RFWD3Q6PCD5 774 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ARHGAP12Q8IWW6 846 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 EMILIN2Q9BXX0 1053 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 CATSPERBQ9H7T0 1116 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SAYSD1Q9NPB0 183 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SHOC2Q9UQ13 582 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 LZTS1Q9Y250 596 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 IRAK3Q9Y616 596 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 C5orf60A6NFR6 353 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 CCDC85CA6NKD9 419 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 TRDMT1O14717 391 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 FGF10O15520 208 aaPredicted RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 RIPK2O43353 540 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 GLUD1P00367 558 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 OAS1P00973 400 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 KLKB1P03952 638 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 GJA1P17302 382 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 GABRR2P28476 465 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 SERPINB6P35237 376 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 PBX2P40425 430 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 RING1Q06587 406 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 PPIDQ08752 370 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 GALNT2Q10471 571 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 KCNJ11Q14654 390 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 MSS51Q4VC12 460 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 CEP85LQ5SZL2 805 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 ARHGEF18Q6ZSZ5 1173 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 GAREM2Q75VX8 874 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 PCGF5Q86SE9 256 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 CHSY1Q86X52 802 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 DENND1CQ8IV53 801 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 ARL8AQ96BM9 186 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 PRMT1Q99873 361 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 SLC39A8Q9C0K1 460 aa12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 HBS1LQ9Y450 684 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-203ENST00000389980 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 A0A0A0MRY4 1105 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 MYO1CO00159 1063 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 RFPL2O75678 378 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 APRTP07741 180 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 SLC6A4P31645 630 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 CLCN4P51793 760 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 NRG1Q02297 640 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 ITIH5Q86UX2 942 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 NLRP14Q86W24 1093 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 CCDC13Q8IYE1 715 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF567Q8N184 647 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 CFAP52Q8N1V2 620 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF276Q8N554 614 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 ARL14EPQ8N8R7 260 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 RTL3Q8N8U3 475 aaKnown RBP12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 SPATA13Q96N96 652 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 NINJ2Q9NZG7 142 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 YBX2Q9Y2T7 364 aaKnown RBP12.52□□□□□ -0.41
SPTBN1-203ENST00000389980 C5orf67F2Z3F1 127 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 PER2O15055 1255 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 AVILO75366 819 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 STC2O76061 302 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 MBL2P11226 248 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 MAGEA4P43358 317 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 KPNA1P52294 538 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 ZXDBP98169 803 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF844Q08AG5 666 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 PDIA2Q13087 525 aaKnown RBP12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 ZBTB17Q13105 803 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 HIF1AQ16665 826 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 STXBP5Q5T5C0 1151 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 NUGGCQ68CJ6 796 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 DENND2CQ68D51 928 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 USP33Q8TEY7 942 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 HDAC11Q96DB2 347 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 RPRD1AQ96P16 312 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 CORO1BQ9BR76 489 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms