RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 LIN28AQ9H9Z2 209 aaKnown RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 COL20A1Q9P218 1284 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ZNRF3Q9ULT6 936 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 AKAP11Q9UKA4 1901 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 TCRBV7S3A2A0A539 114 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 DYTNA2CJ06 578 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 SLCO1B7G3V0H7 640 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ARHGEF9O43307 516 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 BAIAP3O94812 1187 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ASS1P00966 412 aaKnown RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 PSME3P61289 254 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 TSTA3Q13630 321 aaPredicted RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 CYP51A1Q16850 503 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 UNC5AQ6ZN44 842 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 DPP9Q86TI2 863 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ADAM32Q8TC27 787 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 CPB2Q96IY4 423 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 TNIP3Q96KP6 325 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ZC4H2Q9NQZ6 224 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 GPX6P59796 221 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 CCNA1P78396 465 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 NFYCQ13952 458 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 TTLL4Q14679 1199 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 CRY2Q49AN0 593 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 VSIG10LQ86VR7 867 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 CHSY1Q86X52 802 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 PRR11Q96HE9 360 aaPredicted RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 LENG8Q96PV6 779 aaPredicted RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 ST6GALNAC4Q9H4F1 302 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 EURLQ9NYK6 297 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 H2AFYO75367 372 aaKnown RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 CCDC166P0CW27 439 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 PGAM1P18669 254 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 MOGSQ13724 837 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 SIX1Q15475 284 aaPredicted RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 TRAF7Q6Q0C0 670 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ZPBP2Q6X784 338 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 CCDC80Q76M96 950 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 CAPSLQ8WWF8 208 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 UTP4Q969X6 686 aaKnown RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 NOL11Q9H8H0 719 aaKnown RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 CLK4Q9HAZ1 481 aaKnown RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 PNPLA3Q9NST1 481 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 RNF103O00237 685 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 RNASEH1O60930 286 aaKnown RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 DDHD2O94830 711 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 TMEM63BQ5T3F8 832 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 TERB1Q8NA31 727 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 SMARCAD1Q9H4L7 1026 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 RUBCNLQ9H714 662 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 GPRC5DQ9NZD1 345 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 COPG2Q9UBF2 871 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 ITGA11Q9UKX5 1188 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 VANGL2Q9ULK5 521 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 H3BSA7 217 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 VWA5AO00534 786 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 BIRC5O15392 142 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 MFN2O95140 757 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 ASLP04424 464 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 ZNF143P52747 638 aaPredicted RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 SLC5A3P53794 718 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 YWHAZP63104 245 aaKnown RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 FRA10AC1Q70Z53 315 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 RNF139Q8WU17 664 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 OAS1P00973 400 aaKnown RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 GABRB2P47870 512 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 LSM3P62310 102 aaKnown RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 MSS51Q4VC12 460 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 TRAPPC12Q8WVT3 735 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 CPXM1Q96SM3 734 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 TBCBQ99426 244 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 PCDHA11Q9Y5I1 949 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 LAMB4A4D0S4 1761 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 LSM1O15116 133 aaKnown RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 IMPG1Q17R60 797 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 LDLRAP1Q5SW96 308 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 EGFLAMQ63HQ2 1017 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 DRICH1Q6PGQ1 229 aaPredicted RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 STK32CQ86UX6 486 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 APPL2Q8NEU8 664 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 HERPUD2Q9BSE4 406 aa14.54□□□□□ -0.08
RTF1-201ENST00000389629 SNRNP25Q9BV90 132 aaKnown RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
RTF1-201ENST00000389629 LRPAP1P30533 357 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 CSE1LP55060 971 aaKnown RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 ADCY4Q8NFM4 1077 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 RNF145Q96MT1 663 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 BTBD9Q96Q07 612 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 EXOSC4Q9NPD3 245 aaKnown RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 TPD52L2O43399 206 aaKnown RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 UBE3AQ05086 875 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 TRIM25Q14258 630 aaKnown RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 PRKD1Q15139 912 aaPredicted RBP14.53□□□□□ -0.08
RTF1-201ENST00000389629 GRTP1Q5TC63 336 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 CAMK1DQ8IU85 385 aa14.53□□□□□ -0.08
RTF1-201ENST00000389629 DSELQ8IZU8 1212 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms