RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 C9orf57Q5W0N0 161 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 TRIM74Q86UV6 250 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 TRIM73Q86UV7 250 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 CBX4O00257 560 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 RBL1P28749 1068 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 GLRBP48167 497 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 NOVP48745 357 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 TBL3Q12788 808 aaKnown RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 SLC5A9Q2M3M2 681 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 NOMO2Q5JPE7 1267 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 MARK2Q7KZI7 788 aaKnown RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 SIX2Q9NPC8 291 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 CYLDQ9NQC7 956 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 PAK5Q9P286 719 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 SFMBT1Q9UHJ3 866 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 PLA2G4CQ9UP65 541 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 RP1L1Q8IWN7 2480 aaPredicted RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 A8MX80 341 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 PRR5-ARHGAP8B1AHC4 643 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 MDM4O15151 490 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 TFE3P19532 575 aaPredicted RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 AXLP30530 894 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 TUBP50607 506 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 ARHGAP8P85298 464 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 GALNT15Q8N3T1 639 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 LTFP02788 710 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 BST1Q10588 318 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 MORF4L2Q15014 288 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 KCNT2Q6UVM3 1135 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 RINLQ6ZS11 566 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 CTU1Q7Z7A3 348 aaKnown RBP19.29■□□□□ 0.68
CSPG5-202ENST00000383738 AFAP1L2Q8N4X5 818 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 DDI1Q8WTU0 396 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 KCNK16Q96T55 309 aa19.29■□□□□ 0.68
CSPG5-202ENST00000383738 PFDN6O15212 129 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 KDM1AO60341 852 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 SOAT2O75908 522 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 TMCC1O94876 653 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 ACAD11Q709F0 780 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 WDR60Q8WVS4 1066 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 CERS4Q9HA82 394 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 DMAP1Q9NPF5 467 aaPredicted RBP19.28■□□□□ 0.68
CSPG5-202ENST00000383738 SOX13Q9UN79 622 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 PCDHB5Q9Y5E4 795 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 ATP6V1G1O75348 118 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 FAM155BO75949 473 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 FESP07332 822 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 PTGIRP43119 386 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 RBM15BQ8NDT2 890 aaKnown RBP19.28■□□□□ 0.68
CSPG5-202ENST00000383738 CMTM5Q96DZ9 223 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 LMCD1Q9NZU5 365 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 ZNF212Q9UDV6 495 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 CITO14578 2027 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 CAPN8A6NHC0 703 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 BUD23O43709 281 aaKnown RBP19.28■□□□□ 0.68
CSPG5-202ENST00000383738 NNMTP40261 264 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 ABL2P42684 1182 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 NDUFV1P49821 464 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 CDH18Q13634 790 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 PMF1Q6P1K2 205 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 NUP93Q8N1F7 819 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 ECSITQ9BQ95 431 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 NT5MQ9NPB1 228 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 TAS2R1Q9NYW7 299 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 PPME1Q9Y570 386 aa19.28■□□□□ 0.68
CSPG5-202ENST00000383738 VNN1O95497 513 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 NPR3P17342 541 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 MAP4P27816 1152 aaKnown RBP19.27■□□□□ 0.68
CSPG5-202ENST00000383738 ILDR2Q71H61 639 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 RBM23Q86U06 439 aaKnown RBP19.27■□□□□ 0.68
CSPG5-202ENST00000383738 RASAL3Q86YV0 1011 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 C12orf56Q8IXR9 622 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 CARNMT1Q8N4J0 409 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 MYLPFQ96A32 169 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 SMARCD1Q96GM5 515 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 IGFLR1Q9H665 355 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 NDFIP2Q9NV92 336 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 TMEM59LQ9UK28 342 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 TDRKHQ9Y2W6 561 aaKnown RBP19.27■□□□□ 0.68
CSPG5-202ENST00000383738 GNGT2O14610 69 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 ACRP10323 421 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 CYP2C18P33260 490 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 ATXN1P54253 815 aaKnown RBP19.27■□□□□ 0.68
CSPG5-202ENST00000383738 NME5P56597 212 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 STX1BP61266 288 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 PTK6Q13882 451 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 PARP6Q2NL67 630 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 ZNF697Q5TEC3 545 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 C16orf59Q7L2K0 433 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 TWNKQ96RR1 684 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 TUBGCP5Q96RT8 1024 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 HAUS8Q9BT25 410 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 MTIF3Q9H2K0 278 aaKnown RBP19.27■□□□□ 0.68
CSPG5-202ENST00000383738 ADNPQ9H2P0 1102 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 ETNK2Q9NVF9 386 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 PTPRJQ12913 1337 aa19.27■□□□□ 0.68
CSPG5-202ENST00000383738 MYBPHLA2RUH7 354 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 E7ENQ6 273 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 B4GALT4O60513 344 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 ERBB2P04626 1255 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms