RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TFAP2BQ92481 460 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 RCN3Q96D15 328 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 SENP6Q9GZR1 1112 aaPredicted RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 CISHQ9NSE2 258 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 KCNH4Q9UQ05 1017 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 TMX2-CTNND1H3BSU7 103 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 CXCL11O14625 94 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 GAS2O43903 313 aaKnown RBP14.18□□□□□ -0.14
SDC1-202ENST00000381150 PRKCBP05771 671 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 GJB1P08034 283 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 NR1H2P55055 460 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 GRM2Q14416 872 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 TEDDM1Q5T9Z0 273 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 WDR78Q5VTH9 848 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 BBS12Q6ZW61 710 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 PCDH20Q8N6Y1 951 aaKnown RBP14.18□□□□□ -0.14
SDC1-202ENST00000381150 ZNF781Q8N8C0 355 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 UBA3Q8TBC4 463 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 ACTRT2Q8TDY3 377 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 SERPINI1Q99574 410 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 ZDHHC7Q9NXF8 308 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 USP18Q9UMW8 372 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 EVPLQ92817 2033 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 H3BNX3 289 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 SLC25A27O95847 323 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 IQCF3P0C7M6 154 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
SDC1-202ENST00000381150 CDH2P19022 906 aaPredicted RBP14.18□□□□□ -0.14
SDC1-202ENST00000381150 CDH5P33151 784 aaPredicted RBP14.18□□□□□ -0.14
SDC1-202ENST00000381150 C1QTNF12Q5T7M4 302 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 UTS2BQ765I0 119 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 ERO1BQ86YB8 467 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 ZNF786Q8N393 782 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 TRAPPC12Q8WVT3 735 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 COPS5Q92905 334 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 OR52B2Q96RD2 323 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 C1orf21Q9H246 121 aa14.18□□□□□ -0.14
SDC1-202ENST00000381150 CCR10P46092 362 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 KLF10Q13118 480 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 DUOXA2Q1HG44 320 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 FSCBQ5H9T9 825 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 ATP6V1E2Q96A05 226 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 BTBD9Q96Q07 612 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 MINDY3Q9H8M7 445 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 APOC4-APOC2K7ER74 178 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 KLF11O14901 512 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 CASQ2O14958 399 aaPredicted RBP14.17□□□□□ -0.14
SDC1-202ENST00000381150 APOC2P02655 101 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 ASPAP45381 313 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 OR6B2Q6IFH4 312 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 PPP1R2P3Q6NXS1 205 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 XKR5Q6UX68 686 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
SDC1-202ENST00000381150 DCPSQ96C86 337 aaKnown RBP14.17□□□□□ -0.14
SDC1-202ENST00000381150 CIB1Q99828 191 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 ADPGKQ9BRR6 497 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 TIMMDC1Q9NPL8 285 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 TMEM216Q9P0N5 145 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 GMEB1Q9Y692 573 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 ACKR2O00590 384 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 B4GALT5O43286 388 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 PRPSAP2O60256 369 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 HMGCRP04035 888 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 THRAP10827 490 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 POLR2BP30876 1174 aaKnown RBP14.17□□□□□ -0.14
SDC1-202ENST00000381150 GLRBP48167 497 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 EEF1DP3Q658K8 133 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 SH2D5Q6ZV89 423 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 KBTBD6Q86V97 674 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 THNSL1Q8IYQ7 743 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 NIF3L1Q9GZT8 377 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 EPS15L1Q9UBC2 864 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 PCDHGC3Q9UN70 934 aa14.17□□□□□ -0.14
SDC1-202ENST00000381150 E7ESA3 106 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 B4GALT4O60513 344 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 MT-CO1P00395 513 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 IREB2P48200 963 aaKnown RBP14.16□□□□□ -0.14
SDC1-202ENST00000381150 RGS7P49802 495 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 OGFOD2Q6N063 350 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 MPZL3Q6UWV2 235 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 MAVSQ7Z434 540 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 SULF1Q8IWU6 871 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 ARFGAP1Q8N6T3 406 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 NPAS2Q99743 824 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 PCDHAC1Q9H158 963 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 ITGA11Q9UKX5 1188 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 GOLGA8TH3BQL2 631 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 LSM8O95777 96 aaKnown RBP14.16□□□□□ -0.14
SDC1-202ENST00000381150 ESRRGP62508 458 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 MS4A2Q01362 244 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 FBXO16Q8IX29 292 aaPredicted RBP14.16□□□□□ -0.14
SDC1-202ENST00000381150 TMEM192Q8IY95 271 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 DSELQ8IZU8 1212 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 MARVELD2Q8N4S9 558 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 KYQ8NBH2 561 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 HAUS8Q9BT25 410 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms