RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NVLO15381 856 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 AVILO75366 819 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 ASMTLO95671 621 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 PSEN1P49768 467 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 SERPINB8P50452 374 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 C16orf59Q7L2K0 433 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 SCLYQ96I15 445 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 MS4A4AQ96JQ5 239 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 R3HDMLQ9H3Y0 253 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 YJEFN3A6XGL0 299 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 E7ENQ6 273 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 SLC10A3P09131 477 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 NUDT17P0C025 328 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 CSH1P0DML2 217 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 CSH2P0DML3 217 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 CCNB1P14635 433 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 PTPN9P43378 593 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 ABCG1P45844 678 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 NPY2RP49146 381 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 SLC5A3P53794 718 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 ATXN1P54253 815 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 CSE1LP55060 971 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 PABPC1LQ4VXU2 614 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 C1orf146Q5VVC0 180 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 LRRC43Q8N309 656 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 TMEM199Q8N511 208 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 TRIB2Q92519 343 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 USP13Q92995 863 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 MCRS1Q96EZ8 462 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 EML4Q9HC35 981 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 LOC100653049A0A140TA62 436 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 SPTLC1O15269 473 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 KRT34O76011 436 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 PGAM1P18669 254 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 CNTFP26441 200 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 KCNMB4Q86W47 210 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 DQX1Q8TE96 717 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 UNKQ9C0B0 810 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 SDCBP2Q9H190 292 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 UXTQ9UBK9 157 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 DNMT3LQ9UJW3 386 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 RUVBL2Q9Y230 463 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 MTO1Q9Y2Z2 717 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 A0A0U1RQF3 1178 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 MDM4O15151 490 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 HCRTO43612 131 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 PAGE1O75459 146 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 UBOX5O94941 541 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ERVK-10P10266 1014 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 WARSP23381 471 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 MMP13P45452 471 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ECHDC2Q86YB7 292 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 SUGP1Q8IWZ8 645 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 PYROXD2Q8N2H3 581 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 XYLT2Q9H1B5 865 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 CFAP73A6NFT4 308 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 BGNP21810 368 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 RGS4P49798 205 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 AGAP9Q5VTM2 703 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ZNF470Q6ECI4 717 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 TXNRD3NBQ6F5E7 133 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 LPCAT1Q8NF37 534 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ZMAT2Q96NC0 199 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ZBTB18Q99592 522 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 A0A1W2PQH9 124 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ERI2A8K979 691 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ALOX15BO15296 676 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 CRTAMO95727 393 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 HIST1H2AGP0C0S8 130 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 TCF4P15884 667 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 HIST1H2ADP20671 130 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 GJA9P57773 515 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 TMTC4Q5T4D3 741 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 THEMIS2Q5TEJ8 643 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 FUKQ8N0W3 1084 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 CRYBG2Q8N1P7 616 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 PIP4K2CQ8TBX8 421 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 RSPH1Q8WYR4 309 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 DDX1Q92499 740 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 HIST1H2AHQ96KK5 128 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 HIST1H2AJQ99878 128 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 PTPN18Q99952 460 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 H2AFJQ9BTM1 129 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ADGRE3Q9BY15 652 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 ZYG11BQ9C0D3 744 aa14.49□□□□□ -0.09
SHROOM1-203ENST00000378679 N4BP2Q86UW6 1770 aaPredicted RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SUPT3HB4E1H0 165 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 CFAP99D6REC4 459 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 TRDMT1O14717 391 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SUPT3HO75486 399 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SRP72O76094 671 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SUPT7LO94864 414 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 EOMESO95936 686 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 PBX3P40426 434 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 WNT7BP56706 349 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 DAOAP59103 153 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 VARS2Q5ST30 1063 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 FUT10Q6P4F1 479 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms