RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 TMA16Q96EY4 203 aaKnown RBP16.23■□□□□ 0.19
CCDC107-204ENST00000378409 KXD1Q9BQD3 176 aa16.23■□□□□ 0.19
CCDC107-204ENST00000378409 LINC00597Q9H2U6 94 aa16.23■□□□□ 0.19
CCDC107-204ENST00000378409 TMEM248Q9NWD8 314 aa16.23■□□□□ 0.19
CCDC107-204ENST00000378409 OBP2AQ9NY56 170 aa16.23■□□□□ 0.19
CCDC107-204ENST00000378409 A0A1B0GVM2 712 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 TCAF2A6NFQ2 919 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 WASH4PA8MWX3 477 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 CCDC188H7C350 402 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 GFRA2O00451 464 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 PHF2O75151 1096 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 MAP3K6O95382 1288 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 SLU7O95391 586 aaKnown RBP16.22■□□□□ 0.19
CCDC107-204ENST00000378409 NR2C2P49116 596 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 CDH4P55283 916 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 NOMO1Q15155 1222 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 MPPE1Q53F39 396 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 VITQ6UXI7 678 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 MTSS1LQ765P7 747 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 CHST9Q7L1S5 443 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 KLHL7Q8IXQ5 586 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 CCDC33Q8N5R6 958 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 LZTR1Q8N653 840 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 KIAA1958Q8N8K9 716 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 OSCP1Q8WVF1 389 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 BHMTQ93088 406 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 CELF6Q96J87 481 aaKnown RBP16.22■□□□□ 0.19
CCDC107-204ENST00000378409 RPGRIP1Q96KN7 1286 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 HOMER3Q9NSC5 361 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 NDFIP2Q9NV92 336 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 THG1LQ9NWX6 298 aaKnown RBP16.22■□□□□ 0.19
CCDC107-204ENST00000378409 DUS2Q9NX74 493 aaKnown RBP16.22■□□□□ 0.19
CCDC107-204ENST00000378409 DONSONQ9NYP3 566 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 DTLQ9NZJ0 730 aa16.22■□□□□ 0.19
CCDC107-204ENST00000378409 TICRRQ7Z2Z1 1910 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 MCF2LO15068 1137 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 CLDN11O75508 207 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 CYBBP04839 570 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 OR1E1P30953 314 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 MAPKAPK2P49137 400 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 EIF3EP60228 445 aaKnown RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 SLC10A2Q12908 348 aaPredicted RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 ZNF177Q13360 481 aaPredicted RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 CCNG2Q16589 344 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 CYP1B1Q16678 543 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 PARM1Q6UWI2 310 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 ZC3H18Q86VM9 953 aaKnown RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 TP53INP2Q8IXH6 220 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 CARNMT1Q8N4J0 409 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 C12orf50Q8NA57 414 aaPredicted RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 LRRN4CLQ8ND94 238 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 ELSPBP1Q96BH3 223 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 KRT12Q99456 494 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 FRMD8P1Q9BZ68 369 aaPredicted RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 PLA2G2FQ9BZM2 168 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.19
CCDC107-204ENST00000378409 RETREG1Q9H6L5 497 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 SPHK2Q9NRA0 654 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 EPS15L1Q9UBC2 864 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 ZNF212Q9UDV6 495 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 DNPEPQ9ULA0 475 aa16.21■□□□□ 0.19
CCDC107-204ENST00000378409 C5orf42Q9H799 3197 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 H7C0C1 242 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 DFFAO00273 331 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 LIASO43766 372 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 CHRNA3P32297 505 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 ATP5OP48047 213 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 BYSLQ13895 437 aaKnown RBP16.2■□□□□ 0.18
CCDC107-204ENST00000378409 GRM2Q14416 872 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 ANO4Q32M45 955 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 EML3Q32P44 896 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 LEXMQ3ZCV2 418 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 LY6G5CQ5SRR4 150 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 TRIM68Q6AZZ1 485 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 CCDC137Q6PK04 289 aaKnown RBP16.2■□□□□ 0.18
CCDC107-204ENST00000378409 BZW1Q7L1Q6 419 aaKnown RBP16.2■□□□□ 0.18
CCDC107-204ENST00000378409 TMEM25Q86YD3 366 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 MFSD6LQ8IWD5 586 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 YAF2Q8IY57 180 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 FGF14Q92915 247 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 IRF7Q92985 503 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 ASIC4Q96FT7 647 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 ZFYVE19Q96K21 471 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 OLFM3Q96PB7 478 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 BBS2Q9BXC9 721 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 KLC2Q9H0B6 622 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 LRRC19Q9H756 370 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 PLK2Q9NYY3 685 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 RAD54BQ9Y620 910 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 MYO10Q9HD67 2058 aa16.2■□□□□ 0.18
CCDC107-204ENST00000378409 KIAA1549LQ6ZVL6 1849 aa16.19■□□□□ 0.18
CCDC107-204ENST00000378409 MYO18AQ92614 2054 aaKnown RBP16.19■□□□□ 0.18
CCDC107-204ENST00000378409 COL4A3Q01955 1670 aa16.19■□□□□ 0.18
CCDC107-204ENST00000378409 C2CD4DB7Z1M9 353 aa16.19■□□□□ 0.18
CCDC107-204ENST00000378409 NEDD8-MDP1E9PL57 170 aa16.19■□□□□ 0.18
CCDC107-204ENST00000378409 H0Y626 953 aa16.19■□□□□ 0.18
CCDC107-204ENST00000378409 RAMP2O60895 175 aa16.19■□□□□ 0.18
CCDC107-204ENST00000378409 ECI2O75521 394 aa16.19■□□□□ 0.18
CCDC107-204ENST00000378409 LUC7L3O95232 432 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms