RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CRADDP78560 199 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 PEX6Q13608 980 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 TEDDM1Q5T9Z0 273 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 C16orf46Q6P387 395 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 TMEM110Q86TL2 294 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC35F5Q8WV83 523 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 DCUN1D1Q96GG9 259 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 CATSPER2Q96P56 530 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC4A5Q9BY07 1137 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 GRIP2Q9C0E4 1043 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 PIH1D1Q9NWS0 290 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 UBAP1Q9NZ09 502 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 NME7Q9Y5B8 376 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 PTPRFP10586 1907 aa17.02■□□□□ 0.32
PCDHA1-201ENST00000378133 DNAJA2O60884 412 aa17.02■□□□□ 0.32
PCDHA1-201ENST00000378133 CNGA3Q16281 694 aa17.02■□□□□ 0.32
PCDHA1-201ENST00000378133 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.32
PCDHA1-201ENST00000378133 C7orf31Q8N865 590 aa17.02■□□□□ 0.32
PCDHA1-201ENST00000378133 MFHAS1Q9Y4C4 1052 aa17.02■□□□□ 0.32
PCDHA1-201ENST00000378133 PPEF2O14830 753 aa17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 ADORA2AP29274 412 aa17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 IDH3AP50213 366 aa17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 RPL10AP62906 217 aaKnown RBP17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 CYLC2Q14093 348 aaPredicted RBP17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 KCTD2Q14681 263 aa17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 PDPK2PQ6A1A2 396 aa17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 CASC4Q6P4E1 433 aa17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 OTUD5Q96G74 571 aa17.02■□□□□ 0.31
PCDHA1-201ENST00000378133 A0A0J9YVX5 310 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 WDR27A2RRH5 827 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 ZMPSTE24O75844 475 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 KCNA4P22459 653 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 CD151P48509 253 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 SMAD1Q15797 465 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 MBLAC2Q68D91 279 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 FRMD7Q6ZUT3 714 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 NETO2Q8NC67 525 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 TFB1MQ8WVM0 346 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 NLRP7Q8WX94 980 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 ZFRQ96KR1 1074 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 PNPOQ9NVS9 261 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 MOCS1Q9NZB8 636 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 HESX1Q9UBX0 185 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 PCDHGB4Q9UN71 923 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 PCDHGB5Q9Y5G0 923 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 PPP2R3BQ9Y5P8 575 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 CSADQ9Y600 493 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 CITO14578 2027 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 RBM47A0AV96 593 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 HCRTO43612 131 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 CDK4P11802 303 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 TPSB2P20231 275 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 STILQ15468 1287 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 TPSAB1Q15661 275 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 MYLK3Q32MK0 819 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 HEATR6Q6AI08 1181 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 PQLC1Q8N2U9 271 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 MRPS26Q9BYN8 205 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 RNF19AQ9NV58 838 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 MTMR10Q9NXD2 777 aa17.01■□□□□ 0.31
PCDHA1-201ENST00000378133 A0A0G2JMZ2 1700 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 LRRC37A2A6NM11 1700 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 GSRP00390 522 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 SERPINB9P50453 376 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 POU5F1BQ06416 359 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 TTLL4Q14679 1199 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 DPYSL2Q16555 572 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 C4orf22Q6V702 233 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 MAVSQ7Z434 540 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 PPP4R1Q8TF05 950 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 CNBD2Q96M20 576 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 ELP3Q9H9T3 547 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 C6orf203Q9P0P8 240 aaPredicted RBP17■□□□□ 0.31
PCDHA1-201ENST00000378133 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 APPL1Q9UKG1 709 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 PSMD13Q9UNM6 376 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 AP4E1Q9UPM8 1137 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 SLC25A27O95847 323 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 FGF3P11487 239 aaPredicted RBP17■□□□□ 0.31
PCDHA1-201ENST00000378133 MTTPP55157 894 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 ADARP55265 1226 aaKnown RBP17■□□□□ 0.31
PCDHA1-201ENST00000378133 ZNF484Q5JVG2 852 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 VWA5B1Q5TIE3 1220 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 IYDQ6PHW0 289 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 PYROXD2Q8N2H3 581 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 TTC39CQ8N584 583 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 ABTB1Q969K4 478 aaPredicted RBP17■□□□□ 0.31
PCDHA1-201ENST00000378133 CSPG4P5Q96PW8 444 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 KCNK16Q96T55 309 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 RBM38Q9H0Z9 239 aaKnown RBP17■□□□□ 0.31
PCDHA1-201ENST00000378133 TIMMDC1Q9NPL8 285 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 DTLQ9NZJ0 730 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 ARHGAP26Q9UNA1 814 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 DMTF1Q9Y222 760 aa17■□□□□ 0.31
PCDHA1-201ENST00000378133 ARHGAP10A1A4S6 786 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 TSPAN1O60635 241 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 TNFAIP8O95379 198 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 SRGAP2BP0DMP2 458 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms