RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ALOX15P16050 662 aaPredicted RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 ZNF26P17031 533 aaPredicted RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 ZNF143P52747 638 aaPredicted RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 GRAMD4Q6IC98 578 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 BRSK2Q8IWQ3 736 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 CHERPQ8IWX8 916 aaKnown RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 ARMC7Q9H6L4 198 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 PCDH18Q9HCL0 1135 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 MYRFQ9Y2G1 1151 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 MFHAS1Q9Y4C4 1052 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 CNTFP26441 200 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 PRDX6P30041 224 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 HSPA13P48723 471 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 CD97P48960 835 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 PDAP1Q13442 181 aaKnown RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 ELMSAN1Q6PJG2 1045 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 KCNT2Q6UVM3 1135 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 WDR49Q8IV35 697 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 MCUQ8NE86 351 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 GFM2Q969S9 779 aaKnown RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 PPWD1Q96BP3 646 aaKnown RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 RMND5BQ96G75 393 aaPredicted RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 HEXIM2Q96MH2 286 aaKnown RBP16.23■□□□□ 0.19
CKAP4-201ENST00000378026 SLC2A11Q9BYW1 496 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 SEPT10Q9P0V9 454 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 CDC14AQ9UNH5 594 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 FIS1Q9Y3D6 152 aa16.23■□□□□ 0.19
CKAP4-201ENST00000378026 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 ENDOD1O94919 500 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 CKMT2P17540 419 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 GLDCP23378 1020 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 ADRM1Q16186 407 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 TMEM132AQ24JP5 1023 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 MTX3Q5HYI7 312 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 Q6ZNX1 250 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 DCLK2Q8N568 766 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 ACMSDQ8TDX5 336 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 CNPY3Q9BT09 278 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 SELENONQ9NZV5 590 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 TUBGCP4Q9UGJ1 667 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 RIPK3Q9Y572 518 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 ADGRA2Q96PE1 1338 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 BCLAF3A2AJT9 711 aaKnown RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 TRIM43BA6NCK2 446 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 JUNP05412 331 aaKnown RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 COL6A2P12110 1019 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 MAGEA3P43357 314 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 MAPK10P53779 464 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 ATXN1P54253 815 aaKnown RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 NCCRP1Q6ZVX7 275 aaPredicted RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 SLC7A3Q8WY07 619 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 SNRNP25Q9BV90 132 aaKnown RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 UNKQ9C0B0 810 aaKnown RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 BCAP29Q9UHQ4 241 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 USP41Q3LFD5 358 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 FAM183BPQ6ZVS7 135 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 SNX31Q8N9S9 440 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 FAM47BQ8NA70 645 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 NGLY1Q96IV0 654 aa16.22■□□□□ 0.19
CKAP4-201ENST00000378026 GATA5Q9BWX5 397 aaPredicted RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
CKAP4-201ENST00000378026 VAPBO95292 243 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 KCNA2P16389 499 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 CYP2F1P24903 491 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 GLRBP48167 497 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 NIPAL4Q0D2K0 466 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 RALGDSQ12967 914 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 ATP1A4Q13733 1029 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 PTK2BQ14289 1009 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 HEATR6Q6AI08 1181 aaKnown RBP16.21■□□□□ 0.19
CKAP4-201ENST00000378026 OGFOD2Q6N063 350 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 XKR5Q6UX68 686 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 THAP11Q96EK4 314 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 MCRS1Q96EZ8 462 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 WNK4Q96J92 1243 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 AGAP3Q96P47 875 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 XYLT2Q9H1B5 865 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 PORCNQ9H237 461 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 LHX5Q9H2C1 402 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 NOL11Q9H8H0 719 aaKnown RBP16.21■□□□□ 0.19
CKAP4-201ENST00000378026 AP4S1Q9Y587 144 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 QSER1Q2KHR3 1735 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 NAMPTP43490 491 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 PTPN11Q06124 597 aaPredicted RBP16.21■□□□□ 0.19
CKAP4-201ENST00000378026 IKBKEQ14164 716 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 XKR3Q5GH77 459 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 STXBP5Q5T5C0 1151 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 GPR141Q7Z602 305 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 ZNF786Q8N393 782 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 RP9Q8TA86 221 aaKnown RBP16.21■□□□□ 0.19
CKAP4-201ENST00000378026 C12orf43Q96C57 262 aaKnown RBP16.21■□□□□ 0.19
CKAP4-201ENST00000378026 PPP1R14BQ96C90 147 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 MRIQ9BWK5 157 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 INO80BQ9C086 356 aaPredicted RBP16.21■□□□□ 0.19
CKAP4-201ENST00000378026 ELOVL4Q9GZR5 314 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 ILKAPQ9H0C8 392 aaPredicted RBP16.21■□□□□ 0.19
CKAP4-201ENST00000378026 DEFB129Q9H1M3 183 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 OLAHQ9NV23 265 aa16.21■□□□□ 0.19
CKAP4-201ENST00000378026 SYBUQ9NX95 663 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms