RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 F5H423 210 aaPredicted RBP17.6■□□□□ 0.41
TRIM27-201ENST00000377194 MAGEB3O15480 346 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 MYL3P08590 195 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 AXLP30530 894 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 RABGGTBP53611 331 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 ADIGQ0VDE8 80 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 MED21Q13503 144 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 C6orf163Q5TEZ5 329 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 CDHR3Q6ZTQ4 885 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 PAQR9Q6ZVX9 377 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 ARCQ7LC44 396 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 NET1Q7Z628 596 aaPredicted RBP17.6■□□□□ 0.41
TRIM27-201ENST00000377194 HIPK4Q8NE63 616 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 HSFY1Q96LI6 401 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 PNPLA8Q9NP80 782 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRIM27-201ENST00000377194 A0A0J9YVX5 310 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 ZNF487B1APH4 448 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 GCATO75600 419 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 KITP10721 976 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 ACTR3P61158 418 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 MAP2K5Q13163 448 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 MSLNQ13421 630 aaPredicted RBP17.59■□□□□ 0.41
TRIM27-201ENST00000377194 HSF5Q4G112 596 aaPredicted RBP17.59■□□□□ 0.41
TRIM27-201ENST00000377194 OTUD1Q5VV17 481 aaPredicted RBP17.59■□□□□ 0.41
TRIM27-201ENST00000377194 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
TRIM27-201ENST00000377194 CHSY1Q86X52 802 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 B3GALNT2Q8NCR0 500 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 MIPOL1Q8TD10 442 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 FAM149B1Q96BN6 582 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 SIGLEC10Q96LC7 697 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 ZNF560Q96MR9 790 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 LGMNQ99538 433 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 MARCOQ9UEW3 520 aaPredicted RBP17.59■□□□□ 0.41
TRIM27-201ENST00000377194 GTF2IRD1Q9UHL9 959 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 ZNF232Q9UNY5 417 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 PTGESO14684 152 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 HUS1O60921 280 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 MATKP42679 507 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 MAGEA3P43357 314 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 HPCAP84074 193 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 SLC18A2Q05940 514 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 KIAA0319Q5VV43 1072 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 UNC5AQ6ZN44 842 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 RBM44Q6ZP01 1051 aaKnown RBP17.59■□□□□ 0.41
TRIM27-201ENST00000377194 PDSS2Q86YH6 399 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 PLA2G4CQ9UP65 541 aa17.59■□□□□ 0.41
TRIM27-201ENST00000377194 SYNJ2BP-COX16A0A087WUM0 186 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 CAPN14A8MX76 684 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 TM7SF2O76062 418 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 SORBS2O94875 1100 aaKnown RBP17.58■□□□□ 0.41
TRIM27-201ENST00000377194 TMCC1O94876 653 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 CELF2O95319 508 aaKnown RBP17.58■□□□□ 0.41
TRIM27-201ENST00000377194 GALK1P51570 392 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 AFF1P51825 1210 aaKnown RBP17.58■□□□□ 0.41
TRIM27-201ENST00000377194 TRMT5Q32P41 509 aaKnown RBP17.58■□□□□ 0.41
TRIM27-201ENST00000377194 DCAF6Q58WW2 860 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 RNF111Q6ZNA4 994 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 SLC26A11Q86WA9 606 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 CDKL3Q8IVW4 592 aaPredicted RBP17.58■□□□□ 0.41
TRIM27-201ENST00000377194 SMC1BQ8NDV3 1235 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 ZNF395Q9H8N7 513 aaPredicted RBP17.58■□□□□ 0.41
TRIM27-201ENST00000377194 COX16Q9P0S2 106 aa17.58■□□□□ 0.41
TRIM27-201ENST00000377194 TRIM49D1C9J1S8 452 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 SPAG6O75602 509 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 PEX2P28328 305 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 SCNN1AP37088 669 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 PNPLA4P41247 253 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 ACADSBP45954 432 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 SYPL2Q5VXT5 272 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 WSCD1Q658N2 575 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 DUS1LQ6P1R4 473 aaKnown RBP17.58■□□□□ 0.4
TRIM27-201ENST00000377194 TRIM42Q8IWZ5 723 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 APOPT1Q96IL0 206 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 CCDC28BQ9BUN5 200 aa17.58■□□□□ 0.4
TRIM27-201ENST00000377194 XPO1O14980 1071 aaKnown RBP17.57■□□□□ 0.4
TRIM27-201ENST00000377194 HNRNPCP07910 306 aaKnown RBP eCLIP17.57■□□□□ 0.47e-7■■■■□ 21.6
TRIM27-201ENST00000377194 NR2C2P49116 596 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 SLC25A52Q3SY17 297 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 FAM91A1Q658Y4 838 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 TWF2Q6IBS0 349 aaKnown RBP17.57■□□□□ 0.4
TRIM27-201ENST00000377194 STRADAQ7RTN6 431 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 MCUQ8NE86 351 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 QKIQ96PU8 341 aaKnown RBP eCLIP17.57■□□□□ 0.45e-14■■■■■ 46.2
TRIM27-201ENST00000377194 HNRNPABQ99729 332 aaKnown RBP17.57■□□□□ 0.4
TRIM27-201ENST00000377194 MECRQ9BV79 373 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 DUSP16Q9BY84 665 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 FZD10Q9ULW2 581 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 MAD1L1Q9Y6D9 718 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 ARHGAP42A6NI28 874 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 CYP2B6P20813 491 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 PRKCHP24723 683 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 SULT1E1P49888 294 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 CRYBB1P53674 252 aaPredicted RBP17.57■□□□□ 0.4
TRIM27-201ENST00000377194 ALDH18A1P54886 795 aaKnown RBP17.57■□□□□ 0.4
TRIM27-201ENST00000377194 PDE1BQ01064 536 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 SV2CQ496J9 727 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 EFHC1Q5JVL4 640 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 HFE2Q6ZVN8 426 aa17.57■□□□□ 0.4
TRIM27-201ENST00000377194 TNIP3Q96KP6 325 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms