RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 NUP205Q92621 2012 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PLIN3O60664 434 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 PMPCBO75439 489 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 FAM200BP0CF97 657 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 SETSIPP0DME0 302 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 COPAP53621 1224 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 ZNF460Q14592 562 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 USP10Q14694 798 aaKnown RBP13.24□□□□□ -0.29
USP11-204ENST00000377107 OTOP3Q7RTS5 596 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 MCUQ8NE86 351 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 FAM136AQ96C01 138 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 C7orf26Q96N11 449 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 FCRL3Q96P31 734 aaPredicted RBP13.24□□□□□ -0.29
USP11-204ENST00000377107 PANX3Q96QZ0 392 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 PPM1HQ9ULR3 514 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
USP11-204ENST00000377107 CD4P01730 458 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 PGAM1P18669 254 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 NFKB1P19838 968 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 LILRA4P59901 499 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 PDCD2Q16342 344 aaPredicted RBP13.24□□□□□ -0.29
USP11-204ENST00000377107 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 SLC25A52Q3SY17 297 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 THEMIS2Q5TEJ8 643 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 LPCAT4Q643R3 524 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 MAB21L3Q8N8X9 362 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 SH3TC2Q8TF17 1288 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 VRTNQ9H8Y1 702 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 SIRPGQ9P1W8 387 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 ZNF180Q9UJW8 692 aa13.24□□□□□ -0.29
USP11-204ENST00000377107 MYBPHLA2RUH7 354 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 BTBD19C9JJ37 291 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SMNDC1O75940 238 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP11-204ENST00000377107 EPHX2P34913 555 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 ACADSBP45954 432 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 PHTF2Q8N3S3 785 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 ZNF781Q8N8C0 355 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SPATA22Q8NHS9 363 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SREK1Q8WXA9 508 aaKnown RBP13.23□□□□□ -0.29
USP11-204ENST00000377107 USP13Q92995 863 aaPredicted RBP13.23□□□□□ -0.29
USP11-204ENST00000377107 ZNF778Q96MU6 729 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 VTA1Q9NP79 307 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SOX13Q9UN79 622 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 ADCY6O43306 1168 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SIN3BO75182 1162 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SERPINE1P05121 402 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 ENO3P13929 434 aaPredicted RBP13.23□□□□□ -0.29
USP11-204ENST00000377107 ANPEPP15144 967 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 NPR3P17342 541 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 EPHA3P29320 983 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 GP5P40197 560 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 PTPN9P43378 593 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SEMA5AQ13591 1074 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 TRIP10Q15642 601 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 TEDDM1Q5T9Z0 273 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 RASIP1Q5U651 963 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP11-204ENST00000377107 ZNF333Q96JL9 665 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 GBP5Q96PP8 586 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 TSC22D3Q99576 134 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 TINF2Q9BSI4 451 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 NUF2Q9BZD4 464 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 WDCPQ9H6R7 721 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 DCDC2Q9UHG0 476 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 FZD10Q9ULW2 581 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 DOCK1Q14185 1865 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 DPYSL4O14531 572 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 DARSP14868 501 aaKnown RBP13.23□□□□□ -0.29
USP11-204ENST00000377107 TPSB2P20231 275 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SPRP35270 261 aaPredicted RBP13.23□□□□□ -0.29
USP11-204ENST00000377107 CTBP1Q13363 440 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 TPSAB1Q15661 275 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 SV2CQ496J9 727 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 PDZD4Q76G19 769 aaPredicted RBP13.23□□□□□ -0.29
USP11-204ENST00000377107 UNC93AQ86WB7 457 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 ACVR1CQ8NER5 493 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 EXT2Q93063 718 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 CYP4F12Q9HCS2 524 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 LRRC42Q9Y546 428 aa13.23□□□□□ -0.29
USP11-204ENST00000377107 CCDC160A6NGH7 325 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 TK2O00142 265 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 TRAFD1O14545 582 aaPredicted RBP13.22□□□□□ -0.29
USP11-204ENST00000377107 POMCP01189 267 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 AMHP03971 560 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 CHRNGP07510 517 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.291e-6■■□□□ 11.7
USP11-204ENST00000377107 MPP3Q13368 585 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 SNX17Q15036 470 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 WNT8BQ93098 351 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 TKTL2Q9H0I9 626 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 IPPQ9Y573 584 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
USP11-204ENST00000377107 NOS2P35228 1153 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 NUDT2P50583 147 aa13.22□□□□□ -0.29
USP11-204ENST00000377107 CACNA2D1P54289 1103 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms