RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 DCLK2Q8N568 766 aa25.92■■□□□ 1.74
C9orf40-201ENST00000376854 NPY6RQ99463 290 aa25.92■■□□□ 1.74
C9orf40-201ENST00000376854 GOLGA2P5Q9HBQ8 144 aa25.92■■□□□ 1.74
C9orf40-201ENST00000376854 MYO18AQ92614 2054 aaKnown RBP25.91■■□□□ 1.74
C9orf40-201ENST00000376854 CCDC189A1A4V9 331 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 KCNK1O00180 336 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 ALOX15P16050 662 aaPredicted RBP25.91■■□□□ 1.74
C9orf40-201ENST00000376854 PNPLA4P41247 253 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 HARS2P49590 506 aaKnown RBP25.91■■□□□ 1.74
C9orf40-201ENST00000376854 TAF6P49848 677 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 DPYSQ14117 519 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 RALGPS1Q5JS13 557 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 VWA5B1Q5TIE3 1220 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 PDPK2PQ6A1A2 396 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 OR52E8Q6IFG1 317 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 B3GALNT2Q8NCR0 500 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 OR6J1Q8NGC5 347 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 NT5C3BQ969T7 300 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 DUSP16Q9BY84 665 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 KLHL8Q9P2G9 620 aaPredicted RBP25.91■■□□□ 1.74
C9orf40-201ENST00000376854 MAGEA13PA6NCF6 341 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 HUS1O60921 280 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 MYL4P12829 197 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 DSG1Q02413 1049 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 CCDC153Q494R4 210 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 DPP9Q86TI2 863 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 GATA6Q92908 595 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 ATXN7L3BQ96GX2 97 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 AGAP3Q96P47 875 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 PPP1R12CQ9BZL4 782 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 STAP1Q9ULZ2 295 aa25.91■■□□□ 1.74
C9orf40-201ENST00000376854 CLDN5O00501 218 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 ZNF195O14628 629 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 USP1O94782 785 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 NDUFV1P49821 464 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 DEUP1Q05D60 604 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 DGKDQ16760 1214 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 SYPL2Q5VXT5 272 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 BNIPLQ7Z465 357 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 ZNF669Q96BR6 464 aaPredicted RBP25.9■■□□□ 1.74
C9orf40-201ENST00000376854 MS4A4AQ96JQ5 239 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 RBBP8Q99708 897 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 LRRC40Q9H9A6 602 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 DDX43Q9NXZ2 648 aaKnown RBP25.9■■□□□ 1.74
C9orf40-201ENST00000376854 ADAM28Q9UKQ2 775 aa25.9■■□□□ 1.74
C9orf40-201ENST00000376854 DCLK1O15075 740 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 USP12O75317 370 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 IRX1P78414 480 aaPredicted RBP25.89■■□□□ 1.74
C9orf40-201ENST00000376854 NAIF1Q69YI7 327 aaPredicted RBP25.89■■□□□ 1.74
C9orf40-201ENST00000376854 TNS4Q8IZW8 715 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 HNRNPABQ99729 332 aaKnown RBP25.89■■□□□ 1.74
C9orf40-201ENST00000376854 SHCBP1LQ9BZQ2 653 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 PIGVQ9NUD9 493 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 RRN3P2A6NIE6 340 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 ENO4A6NNW6 628 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 BEST1O76090 585 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 DARSP14868 501 aaKnown RBP25.89■■□□□ 1.74
C9orf40-201ENST00000376854 NCF2P19878 526 aaPredicted RBP25.89■■□□□ 1.74
C9orf40-201ENST00000376854 SPRP35270 261 aaPredicted RBP25.89■■□□□ 1.74
C9orf40-201ENST00000376854 MAGEA12P43365 314 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 PSEN1P49768 467 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 SERPINB8P50452 374 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 CDK7P50613 346 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 GTF2A2P52657 109 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 CACNA2D1P54289 1103 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 GSTA3Q16772 222 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 DUSP28Q4G0W2 176 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 AAGABQ6PD74 315 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 LIMS2Q7Z4I7 341 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 GPR142Q7Z601 462 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 STRA8Q7Z7C7 330 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 OSTM1Q86WC4 334 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.89■■□□□ 1.74
C9orf40-201ENST00000376854 WNT8BQ93098 351 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 CMTM5Q96DZ9 223 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 MAML3Q96JK9 1138 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 ECSITQ9BQ95 431 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 LRRC4Q9HBW1 653 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 S100A14Q9HCY8 104 aa25.89■■□□□ 1.74
C9orf40-201ENST00000376854 CCL15-CCL14A0A0B4J2E2 113 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 HOXD8P13378 290 aaPredicted RBP25.88■■□□□ 1.73
C9orf40-201ENST00000376854 SOX4Q06945 474 aaPredicted RBP25.88■■□□□ 1.73
C9orf40-201ENST00000376854 CCL15Q16663 113 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 SV2CQ496J9 727 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 PLD6Q8N2A8 252 aaKnown RBP25.88■■□□□ 1.73
C9orf40-201ENST00000376854 BRI3BPQ8WY22 251 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 ISL2Q96A47 359 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 VANGL2Q9ULK5 521 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 PIN4Q9Y237 131 aaKnown RBP25.88■■□□□ 1.73
C9orf40-201ENST00000376854 ASB3Q9Y575 518 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 MAP3K13O43283 966 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 CCNT2O60583 730 aaKnown RBP25.88■■□□□ 1.73
C9orf40-201ENST00000376854 SMIM24O75264 130 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 NPR3P17342 541 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 PTPN3P26045 913 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 CRABP2P29373 138 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 LIMK2P53671 638 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 CDC42EP1Q00587 391 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 FSTL4Q6MZW2 842 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 OR6Y1Q8NGX8 325 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms