RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RAG1P15918 1043 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 SERPINB6P35237 376 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 SULT1E1P49888 294 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 CDK7P50613 346 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 BCAT1P54687 386 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 SNX16P57768 344 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 DLG1Q12959 904 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 NAB1Q13506 487 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 MTHFD1LQ6UB35 978 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 SLC2A14Q8TDB8 520 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 RNF139Q8WU17 664 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 KBTBD7Q8WVZ9 684 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 FAM149B1Q96BN6 582 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 EIF2AQ9BY44 585 aaKnown RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 PCDHB12Q9Y5F1 795 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 PPP2R3BQ9Y5P8 575 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 CREB3O43889 395 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 POLBP06746 335 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 MYL4P12829 197 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 COX4I1P13073 169 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 MX2P20592 715 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 TKTP29401 623 aaKnown RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 NME8Q8N427 588 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 ZNF669Q96BR6 464 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 GORASP1Q9BQQ3 440 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 KLHL4Q9C0H6 718 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 MAGED2Q9UNF1 606 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 CSADQ9Y600 493 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 G3V2L1 256 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 H3BNX3 289 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 STK10O94804 968 aaKnown RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 GSTT1P30711 240 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 MAGEA12P43365 314 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 TMEM62Q0P6H9 643 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 KLF10Q13118 480 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 RBBP5Q15291 538 aaKnown RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 TRIP10Q15642 601 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 KIZQ2M2Z5 673 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 CNPY1Q3B7I2 92 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 EPGNQ6UW88 154 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-202ENST00000376839 STRA8Q7Z7C7 330 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 FBXW8Q8N3Y1 598 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 ACVR1CQ8NER5 493 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 JADE3Q92613 823 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 SNX27Q96L92 541 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 OR52B2Q96RD2 323 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 RBBP8Q99708 897 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 CPNE1Q99829 537 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 NAT9Q9BTE0 207 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 CDH19Q9H159 772 aa13.54□□□□□ -0.24
ACTN1-202ENST00000376839 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
ACTN1-202ENST00000376839 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-202ENST00000376839 HSPA4LO95757 839 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 LTFP02788 710 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 GARSP41250 739 aaKnown RBP13.53□□□□□ -0.24
ACTN1-202ENST00000376839 GRIA2P42262 883 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 MATKP42679 507 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 GLUD2P49448 558 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 ZBTB6Q15916 424 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 LIN52Q52LA3 116 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 DCAF6Q58WW2 860 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 FSTL4Q6MZW2 842 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 PID1Q7Z2X4 250 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 UNC93AQ86WB7 457 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 SPTLC1O15269 473 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 UQCRBP14927 111 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 HOXA11P31270 313 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-202ENST00000376839 RPL34P49207 117 aaKnown RBP13.53□□□□□ -0.24
ACTN1-202ENST00000376839 IFRD2Q12894 506 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-202ENST00000376839 SLC25A52Q3SY17 297 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 CCDC153Q494R4 210 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 RASIP1Q5U651 963 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 C9orf57Q5W0N0 161 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 PPP1R36Q96LQ0 422 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 LENG8Q96PV6 779 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-202ENST00000376839 SPATA16Q9BXB7 569 aa13.53□□□□□ -0.24
ACTN1-202ENST00000376839 OTOFQ9HC10 1997 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 A0A096LPK6 155 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 CYP2C8P10632 490 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 VCLP18206 1134 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 SCNN1AP37088 669 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 SERPINB8P50452 374 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 PGGT1BP53609 377 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 LIMK2P53671 638 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 MTTPP55157 894 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 ADIGQ0VDE8 80 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 MED21Q13503 144 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 PDK1Q15118 436 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 ARMCX2Q7L311 632 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms