RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CDHR5Q9HBB8 845 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 EPS15L1Q9UBC2 864 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 MYRFQ9Y2G1 1151 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 HES2Q9Y543 173 aa12.45□□□□□ -0.42
C9orf3-203ENST00000375315 FAM47E-STBD1D6RA91 191 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 PSMD12O00232 456 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-203ENST00000375315 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 KDM1AO60341 852 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CTSHP09668 335 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CCDC130P13994 396 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 ALCAMQ13740 583 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-203ENST00000375315 IER5Q5VY09 327 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 OGFOD2Q6N063 350 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 TICAM1Q8IUC6 712 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 ISOC1Q96CN7 298 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 NTPCRQ9BSD7 190 aaKnown RBP12.44□□□□□ -0.42
C9orf3-203ENST00000375315 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CAAP1Q9H8G2 361 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 DNPEPQ9ULA0 475 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CDH7Q9ULB5 785 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 LOC285556D6RIA3 1793 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CCDC195A0A1B0GUA6 201 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 PFDN6O15212 129 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CDKL1Q00532 357 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 KCNC4Q03721 635 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 SREBF2Q12772 1141 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 PLPPR4Q7Z2D5 763 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 FAM71AQ8IYT1 594 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 RNF169Q8NCN4 708 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 PPTC7Q8NI37 304 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 DNAJB3Q8WWF6 145 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 OLFM1Q99784 485 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 EBF4Q9BQW3 602 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 MECRQ9BV79 373 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
C9orf3-203ENST00000375315 FAM189A1O60320 539 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 FBXO21O94952 628 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 ETS1P14921 441 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 CD58P19256 250 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 ITGAXP20702 1163 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-203ENST00000375315 KRT80Q6KB66 452 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 NANOGP8Q6NSW7 305 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 SLC47A2Q86VL8 602 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 FBXO36Q8NEA4 188 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 C12orf43Q96C57 262 aaKnown RBP12.44□□□□□ -0.42
C9orf3-203ENST00000375315 SERPINI1Q99574 410 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A9O60656 530 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 C22orf31O95567 290 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 C8BP07358 591 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 TSHRP16473 764 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A6P19224 532 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A1P22309 533 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A4P22310 534 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A3P35503 534 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A5P35504 534 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 GJC1P36383 396 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 GSSP48637 474 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 FAAP100Q0VG06 881 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 DRICH1Q6PGQ1 229 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-203ENST00000375315 KATNAL2Q8IYT4 538 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 RMND5BQ96G75 393 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-203ENST00000375315 FERMT1Q9BQL6 677 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 OSBPL10Q9BXB5 764 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A7Q9HAW7 530 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A10Q9HAW8 530 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UGT1A8Q9HAW9 530 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 ANLNQ9NQW6 1124 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 SIRPGQ9P1W8 387 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 EBF1Q9UH73 591 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 ARHGAP26Q9UNA1 814 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 NOX1Q9Y5S8 564 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 UBE4BO95155 1302 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 TREHO43280 583 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 BMP10O95393 424 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 IFNB1P01574 187 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 STX3Q13277 289 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 ORC1Q13415 861 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 MORN1Q5T089 497 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 KIAA0319LQ8IZA0 1049 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-203ENST00000375315 HM13Q8TCT9 377 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 TRIB2Q92519 343 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 HSPH1Q92598 858 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 COPS7BQ9H9Q2 264 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-203ENST00000375315 PCDH9Q9HC56 1237 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
C9orf3-203ENST00000375315 A0A1B0GTW7 788 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ARHGEF37A1IGU5 675 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 H3BNH8 94 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms