RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 NCKIPSDQ9NZQ3 722 aa10.47□□□□□ -0.73
HLA-DRA-201ENST00000374982 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
HLA-DRA-201ENST00000374982 A0A1W2PQH9 124 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 A8MXQ7 604 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 NTN3O00634 580 aaPredicted RBP10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 AP1G2O75843 785 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 BEST1O76090 585 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 FAM13AO94988 1023 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 PLA2G4BP0C869 781 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 PABPC1P11940 636 aaKnown RBP10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 SLC6A4P31645 630 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 ZNF131P52739 623 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 NR0B2Q15466 257 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 HNRNPA1L2Q32P51 320 aaKnown RBP10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 TTC38Q5R3I4 469 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 C9orf64Q5T6V5 341 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 DYMQ7RTS9 669 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 GPRIN1Q7Z2K8 1008 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 TMEM145Q8NBT3 493 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 ZNF548Q8NEK5 533 aaPredicted RBP10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 OR13H1Q8NG92 308 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 ANKRD36BP1Q96IX9 119 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 SMOQ99835 787 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 CCDC3Q9BQI4 270 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 DCLK3Q9C098 648 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 STRADBQ9C0K7 418 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 PARVGQ9HBI0 331 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 DNAJC28Q9NX36 388 aa10.46□□□□□ -0.73
HLA-DRA-201ENST00000374982 SHANK1Q9Y566 2161 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 A0A1W2PQ27 194 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 A0A1W2PQ64 194 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 A0A1W2PQC6 194 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 VWA3AA6NCI4 1184 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 RIOK3O14730 519 aaKnown RBP10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 DIAPH2O60879 1101 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 ADH1BP00325 375 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 POLR2EP19388 210 aaKnown RBP10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 NR1D1P20393 614 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 C5AR1P21730 350 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 DRD3P35462 400 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 ETV5P41161 510 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 METAP1P53582 386 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 NAA30Q147X3 362 aaPredicted RBP10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 POSTNQ15063 836 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 DEFB133Q30KQ1 61 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 MPPE1Q53F39 396 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 SETMARQ53H47 684 aaPredicted RBP10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 TRIM69Q86WT6 500 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 FAM217AQ8IXS0 508 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 SLC22A18ASQ8N1D0 253 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 EFCAB3Q8N7B9 438 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 OR5B17Q8NGF7 314 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 WFDC5Q8TCV5 224 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 IFT43Q96FT9 208 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 CATSPER2Q96P56 530 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 FAM129BQ96TA1 746 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 INTS13Q9NVM9 706 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 RASAL2Q9UJF2 1139 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 SALL4Q9UJQ4 1053 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 SCML2Q9UQR0 700 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 TP53TG5Q9Y2B4 290 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 LOXL2Q9Y4K0 774 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 CYP46A1Q9Y6A2 500 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 PDZD2O15018 2839 aa10.45□□□□□ -0.74
HLA-DRA-201ENST00000374982 PCSK5Q92824 1860 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 HIVEP1P15822 2718 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 GOLGA8IPA6NC78 632 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 GOLGA8JA6NMD2 632 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 C9orf172C9J069 976 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 D6RAR5 112 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 AGRPO00253 132 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 PLRG1O43660 514 aaKnown RBP10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 PFKFB2O60825 505 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 PRLRP16471 622 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 ABCD1P33897 745 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 MAP3K7CLP57077 242 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 ST8SIA6P61647 398 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 HNRNPKP61978 463 aaKnown RBP eCLIP10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 COG7P83436 770 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 TRIM29Q14134 588 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 IL17AQ16552 155 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 HYIQ5T013 277 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 FUKQ8N0W3 1084 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 TEX19Q8NA77 164 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 PDCD6IPQ8WUM4 868 aaKnown RBP10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 USP7Q93009 1102 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 NAT6Q93015 286 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 FAM131CQ96AQ9 280 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 PPP1R13BQ96KQ4 1090 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 HEXIM2Q96MH2 286 aaKnown RBP10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 NOX5Q96PH1 765 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 ZHX3Q9H4I2 956 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 FZD3Q9NPG1 666 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 CSNK1G3Q9Y6M4 447 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 DNHD1Q96M86 4753 aa10.44□□□□□ -0.74
HLA-DRA-201ENST00000374982 HIVEP3Q5T1R4 2406 aa10.43□□□□□ -0.74
HLA-DRA-201ENST00000374982 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.43□□□□□ -0.74
HLA-DRA-201ENST00000374982 K7EM74 188 aa10.43□□□□□ -0.74
HLA-DRA-201ENST00000374982 SLC31A1O15431 190 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms