RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 OVOS1Q6IE37 1185 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 ARCQ7LC44 396 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 MZB1Q8WU39 189 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 CENPIQ92674 756 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-202ENST00000374876 CFAP36Q96G28 342 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC40-202ENST00000374876 ETNK2Q9NVF9 386 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 FNIP2Q9P278 1114 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 AP4E1Q9UPM8 1137 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 HCFC2Q9Y5Z7 792 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 GOLGA8RI6L899 631 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 TM9SF1O15321 606 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 OAZ2O95190 189 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 EPCAMP16422 314 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 TYMPP19971 482 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 PAX3P23760 479 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 CLCN4P51793 760 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 ATXN1P54253 815 aaKnown RBP15.99■□□□□ 0.15
CCDC40-202ENST00000374876 BNIP1Q12981 228 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 ADAM15Q13444 863 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 SNCBQ16143 134 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 KBTBD12Q3ZCT8 623 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 FAXCQ5TGI0 409 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 ICE2Q659A1 982 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 C4orf22Q6V702 233 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 EFHBQ8N7U6 833 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 TNIP3Q96KP6 325 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 SLCO1B3Q9NPD5 702 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 TBC1D4O60343 1298 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 EDF1O60869 148 aaKnown RBP15.98■□□□□ 0.15
CCDC40-202ENST00000374876 GLP2RO95838 553 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 CYP11A1P05108 521 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 ADH1AP07327 375 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 OR4Q2P0C623 313 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 NR2C2P49116 596 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 RPL34P49207 117 aaKnown RBP15.98■□□□□ 0.15
CCDC40-202ENST00000374876 NDUFV1P49821 464 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 NCALDP61601 193 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 YWHAZP63104 245 aaKnown RBP15.98■□□□□ 0.15
CCDC40-202ENST00000374876 MGAT5Q09328 741 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 TBC1D1Q86TI0 1168 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-202ENST00000374876 GPR65Q8IYL9 337 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 ADGRF2Q8IZF7 708 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 BANPQ8N9N5 519 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 CCDC110Q8TBZ0 833 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 TCP10LQ8TDR4 215 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 SLC44A1Q8WWI5 657 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 HSFY1Q96LI6 401 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 TMEM209Q96SK2 561 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 KLF6Q99612 283 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-202ENST00000374876 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCDC40-202ENST00000374876 BACE2Q9Y5Z0 518 aa15.98■□□□□ 0.15
CCDC40-202ENST00000374876 H7C4K7 107 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 HGSO14964 777 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 TGM5O43548 720 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 ADRA1DP25100 572 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 LTBRP36941 435 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 SLC8A3P57103 927 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 ELF3P78545 371 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 GBE1Q04446 702 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 CCDC15Q0P6D6 951 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 KCNC3Q14003 757 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 SETDB1Q15047 1291 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 CTC1Q2NKJ3 1217 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 SLC45A4Q5BKX6 768 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 EFHC1Q5JVL4 640 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 ZNF280DQ6N043 979 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 OSTM1Q86WC4 334 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 METTL23Q86XA0 190 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 SLC22A17Q8WUG5 538 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 LRRN4Q8WUT4 740 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 ZNF75CPQ92670 426 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 THOC1Q96FV9 657 aaKnown RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 RTP3Q9BQQ7 232 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 ETNK1Q9HBU6 452 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 ZC3H7BQ9UGR2 993 aaKnown RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 BRWD1Q9NSI6 2320 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 MAGEA6P43360 314 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 CBLBQ13191 982 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 TOP6BLQ8N6T0 577 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 CCDC185Q8N715 623 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 OR10T2Q8NGX3 314 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 PABPC5Q96DU9 382 aaKnown RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 CSPG4P5Q96PW8 444 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 KCTD15Q96SI1 283 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-202ENST00000374876 PNPLA8Q9NP80 782 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 DSEQ9UL01 958 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 USH1CQ9Y6N9 552 aa15.97■□□□□ 0.15
CCDC40-202ENST00000374876 H3BQ06 376 aaPredicted RBP15.96■□□□□ 0.15
CCDC40-202ENST00000374876 XPO1O14980 1071 aaKnown RBP15.96■□□□□ 0.15
CCDC40-202ENST00000374876 MGRN1O60291 552 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 GCATO75600 419 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 ACAT1P24752 427 aaKnown RBP15.96■□□□□ 0.15
CCDC40-202ENST00000374876 ALDH3A1P30838 453 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 MATKP42679 507 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 CREMQ03060 361 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 SLC8B1Q6J4K2 584 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 STRADAQ7RTN6 431 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 CAND1Q86VP6 1230 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms