RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CHMP2BQ9UQN3 213 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 TLR6Q9Y2C9 796 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PCDHB5Q9Y5E4 795 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 MYADML2A6NDP7 307 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 YJEFN3A6XGL0 299 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 E7ENQ6 273 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 GOLGA8MH3BSY2 632 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ARVCFO00192 962 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 TRAFD1O14545 582 aaPredicted RBP8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 IRAK2O43187 625 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 DNAJC6O75061 913 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 GLRA3O75311 464 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ALDH2P05091 517 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 MPOP05164 745 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 FYNP06241 537 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 COL6A2P12110 1019 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 CKBP12277 381 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 SELPP16109 830 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 PAMP19021 973 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 CES1P23141 567 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC8A1P32418 973 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 RPL10AP62906 217 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ASPHQ12797 758 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC10A2Q12908 348 aaPredicted RBP8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 BNIP1Q12981 228 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 NME3Q13232 169 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 FASTKD3Q14CZ7 662 aaKnown RBP8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 MSS51Q4VC12 460 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ZNF618Q5T7W0 954 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ZNF280DQ6N043 979 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 LVRNQ6Q4G3 990 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 NPNTQ6UXI9 565 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 UNC5AQ6ZN44 842 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 SH2D5Q6ZV89 423 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 PID1Q7Z2X4 250 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 TMEM135Q86UB9 458 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 C10orf67Q8IYJ2 551 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ABI1Q8IZP0 508 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 NUP93Q8N1F7 819 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ANKRD42Q8N9B4 389 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 PDZD8Q8NEN9 1154 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ZMIZ2Q8NF64 920 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 CCDC110Q8TBZ0 833 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 RAET1EQ8TD07 263 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 SH3TC2Q8TF17 1288 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 NSMCE1Q8WV22 266 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 RNF34Q969K3 372 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ISL2Q96A47 359 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 AZIN2Q96A70 460 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 TBC1D31Q96DN5 1066 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ANKRD27Q96NW4 1050 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 FCRL5Q96RD9 977 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 OSBPL7Q9BZF2 842 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 ARHGAP39Q9C0H5 1083 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 PRDM12Q9H4Q4 367 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 KLHL8Q9P2G9 620 aaPredicted RBP8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 PLLPQ9Y342 182 aa8.94□□□□□ -0.98
SNRNP40-202ENST00000373720 CCDC189A1A4V9 331 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM170AA1A519 330 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 TNFRSF10BO14763 440 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 MATN3O15232 486 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 CREB3O43889 395 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 ATP2C2O75185 946 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 TADA2AO75478 443 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 METTL18O95568 372 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 C1QAP02745 245 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 USP17L7P0C7H9 530 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 CCNB1P14635 433 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 EPHB2P29323 1055 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 RPA3P35244 121 aaPredicted RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 GP5P40197 560 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 ETV4P43268 484 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 SCTRP47872 440 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 RENBPP51606 427 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 MNAT1P51948 309 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 NEK3P51956 506 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 KPNA2P52292 529 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 GEMP55040 296 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 MLLT6P55198 1093 aaPredicted RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 WDR4P57081 412 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 YBEYP58557 167 aaPredicted RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 WASHC5Q12768 1159 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 HNRNPDQ14103 355 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 MPP2Q14168 576 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 MRPL58Q14197 206 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 QPCTQ16769 361 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 DEFB115Q30KQ5 88 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 OTUD1Q5VV17 481 aaPredicted RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 SYPL2Q5VXT5 272 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 PDPK2PQ6A1A2 396 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 KLHDC10Q6PID8 442 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 KIAA0408Q6ZU52 694 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 ANKS3Q6ZW76 656 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 GALNT7Q86SF2 657 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 SUGP1Q8IWZ8 645 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 CTAGE3PQ8IX95 158 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 COLGALT2Q8IYK4 626 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 ZNF567Q8N184 647 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 UMODL1-AS1Q8N2C9 162 aa8.93□□□□□ -0.98
SNRNP40-202ENST00000373720 ATP6V0D2Q8N8Y2 350 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms