RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 SMNDC1O75940 238 aaKnown RBP eCLIP14.49□□□□□ -0.09
LMX1B-202ENST00000373474 TSHRP16473 764 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 ATP4AP20648 1035 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 DUPD1Q68J44 220 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 OR6Y1Q8NGX8 325 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 BTBD3Q9Y2F9 522 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 B3GAT3O94766 335 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 EGFRP00533 1210 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 DRG2P55039 364 aaKnown RBP14.49□□□□□ -0.09
LMX1B-202ENST00000373474 MAPK11Q15759 364 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 FAM98BQ52LJ0 330 aaKnown RBP14.49□□□□□ -0.09
LMX1B-202ENST00000373474 FNIP1Q8TF40 1166 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 KAT2BQ92831 832 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 CEP41Q9BYV8 373 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 SPASTQ9UBP0 616 aa14.49□□□□□ -0.09
LMX1B-202ENST00000373474 A0A096LPK6 155 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TISP43B9A030 160 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ZSCAN5DPP0CG00 497 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 DRD4P21917 467 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ZNF157P51786 506 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ADIGQ0VDE8 80 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TOP3AQ13472 1001 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 FASTKQ14296 549 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 POLD3Q15054 466 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TIMM50Q3ZCQ8 353 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TMEM26Q6ZUK4 368 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 DHFR2Q86XF0 187 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 FAM71AQ8IYT1 594 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ANKRD49Q8WVL7 239 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 PRKD2Q9BZL6 878 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 NRDE2Q9H7Z3 1164 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 XPNPEP3Q9NQH7 507 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 DDX43Q9NXZ2 648 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 SF3B1O75533 1304 aaKnown RBP eCLIP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 A0A087X1B8 175 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 CLOCKO15516 846 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 IDH3BO43837 385 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TNFRSF21O75509 655 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ASS1P00966 412 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 GTF2BQ00403 316 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TSNQ15631 228 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 PLEKHH3Q7Z736 793 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ERO1BQ86YB8 467 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 SPATA20Q8TB22 786 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 MKL1Q969V6 931 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TINF2Q9BSI4 451 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TMEM134Q9H6X4 195 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 F8VP50 259 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 NKRFO15226 690 aaKnown RBP eCLIP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 HMGCRP04035 888 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 HSMCR30P0CW71 290 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ALDH6A1Q02252 535 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 POU6F1Q14863 301 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 LRRC38Q5VT99 294 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ZNF184Q99676 751 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 CLPBQ9H078 707 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 NMRK2Q9NPI5 230 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 GAKO14976 1311 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ACKR2O00590 384 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 UPP2O95045 317 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 FYNP06241 537 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ZNF286BP0CG31 522 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ETS1P14921 441 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 TPH1P17752 444 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 WARSP23381 471 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 CENPAP49450 140 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 APOBEC3HQ6NTF7 200 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 NET1Q7Z628 596 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 DCUN1D5Q9BTE7 237 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 C9orf16Q9BUW7 83 aa14.48□□□□□ -0.09
LMX1B-202ENST00000373474 RSL24D1Q9UHA3 163 aaKnown RBP14.48□□□□□ -0.09
LMX1B-202ENST00000373474 ADRB2P07550 413 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 PREPLQ4J6C6 727 aaPredicted RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RIPOR1Q6ZS17 1223 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 POLG2Q9UHN1 485 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 SIGLEC16A6NMB1 481 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 CHI3L1P36222 383 aaPredicted RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 EID3Q8N140 333 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 ADGRE3Q9BY15 652 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RBM22Q9NW64 420 aaKnown RBP eCLIP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 REXO2Q9Y3B8 237 aaKnown RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 VPS4BO75351 444 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 UNC5CO95185 931 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RBL1P28749 1068 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 ATP12AP54707 1039 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 EFEMP1Q12805 493 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 DGKKQ5KSL6 1271 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 ZCCHC23Q6ZST2 131 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 MIB1Q86YT6 1006 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 ATG16L2Q8NAA4 619 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 NMRAL1Q9HBL8 299 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 EURLQ9NYK6 297 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 C2CD2Q9Y426 696 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 ATXN2Q99700 1313 aaKnown RBP14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RBAK-RBAKDNI3L0D1 243 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 TPP1O14773 563 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 BAIAP3O94812 1187 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 CCDC130P13994 396 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 FLT3P36888 993 aa14.47□□□□□ -0.09
LMX1B-202ENST00000373474 RPS7P62081 194 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms