RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 MAPTP10636 758 aaKnown RBP9.07□□□□□ -0.96
ATG4A-203ENST00000372232 PRKCAP17252 672 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A6P19224 532 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 EIF2AK2P19525 551 aaKnown RBP9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A1P22309 533 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A4P22310 534 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 IL32P24001 234 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A3P35503 534 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A5P35504 534 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CHKAP35790 457 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CDK16Q00536 496 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 SPP2Q13103 211 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 SELENBP1Q13228 472 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 TRIP10Q15642 601 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 LSM12Q3MHD2 195 aaKnown RBP9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CBWD6Q4V339 395 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 TJAP1Q5JTD0 557 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CBWD3Q5JTY5 395 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CBWD5Q5RIA9 395 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 HP1BP3Q5SSJ5 553 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CYP4A22Q5TCH4 519 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 FRA10AC1Q70Z53 315 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 GPR180Q86V85 440 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CCDC116Q8IYX3 515 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 RFWD2Q8NHY2 731 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 RMDN1Q96DB5 314 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 PGBD4Q96DM1 585 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 GCNAQ96QF7 691 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 FERMT1Q9BQL6 677 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 MROQ9BYG7 248 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A7Q9HAW7 530 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A10Q9HAW8 530 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A8Q9HAW9 530 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 ERVK-5Q9HDB9 667 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 IL20Q9NYY1 176 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 TBC1D14Q9P2M4 693 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 PCYOX1Q9UHG3 505 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 AGO2Q9UKV8 859 aaKnown RBP9.07□□□□□ -0.96
ATG4A-203ENST00000372232 GRID1Q9ULK0 1009 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 PCDHGB4Q9UN71 923 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 NAALADL1Q9UQQ1 740 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 MTO1Q9Y2Z2 717 aaKnown RBP9.07□□□□□ -0.96
ATG4A-203ENST00000372232 PCDHGB5Q9Y5G0 923 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 A0A0A6YYK5 440 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TGFBR3LH3BV60 316 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 VWA5AO00534 786 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 SNX2O60749 519 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 ACSL3O95573 720 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CRTAMO95727 393 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TRIM49P0CI25 452 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TRIM49CP0CI26 452 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 SRGAP2CP0DJJ0 459 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 SRGAP2BP0DMP2 458 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PLS3P13797 630 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CCDC130P13994 396 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 YWHABP31946 246 aaKnown RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 STAT1P42224 750 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 IREB2P48200 963 aaKnown RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GMPSP49915 693 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 NPEPPSP55786 919 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TRIM16LQ309B1 348 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 NBPF12Q5TAG4 269 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 NDUFAF5Q5TEU4 345 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 RNF207Q6ZRF8 634 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GALNT13Q8IUC8 556 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TERB1Q8NA31 727 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 MINDY2Q8NBR6 621 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TNIP2Q8NFZ5 429 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TMEM174Q8WUU8 243 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PSPC1Q8WXF1 523 aaKnown RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 JADE3Q92613 823 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PRR11Q96HE9 360 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CDHR1Q96JP9 859 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CFAP57Q96MR6 1250 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 RMDN3Q96TC7 470 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 PDCD2LQ9BRP1 358 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TMEM206Q9H813 350 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 C12orf4Q9NQ89 552 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 EPS15L1Q9UBC2 864 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 KCNN3Q9UGI6 736 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 HACL1Q9UJ83 578 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 APPL1Q9UKG1 709 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 NOSIPQ9Y314 301 aaKnown RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GOLGA8QA0A0J9YX86 632 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GOLGA8OA6NCC3 632 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 A6NL46 340 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GOLGA8NF8WBI6 632 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GOLGA8RI6L899 631 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TK2O00142 265 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 KATNA1O75449 491 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 TTC4O95801 387 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CETPP11597 493 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 MYCLP12524 364 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 POLR2CP19387 275 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-203ENST00000372232 CHRNA3P32297 505 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 SOX5P35711 763 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 GIPRP48546 466 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 DLG4P78352 724 aa9.06□□□□□ -0.96
ATG4A-203ENST00000372232 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms