RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TMEM198Q66K66 360 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 C16orf62Q7Z3J2 963 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 THNSL1Q8IYQ7 743 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 NSUN6Q8TEA1 469 aaKnown RBP12.02□□□□□ -0.49
PTPN1-201ENST00000371621 TUBGCP3Q96CW5 907 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF512BQ96KM6 892 aaPredicted RBP12.02□□□□□ -0.49
PTPN1-201ENST00000371621 ARPC5LQ9BPX5 153 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 RAD54BQ9Y620 910 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 KRBA1A5PL33 1030 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 C9JVG2 144 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 LDLRP01130 860 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 SERPINB2P05120 415 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 PDGFRAP16234 1089 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 CACNB3P54284 484 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 TUBA4AP68366 448 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 FASTKQ14296 549 aaKnown RBP12.02□□□□□ -0.49
PTPN1-201ENST00000371621 PRKD1Q15139 912 aaPredicted RBP12.02□□□□□ -0.49
PTPN1-201ENST00000371621 ZBED5Q49AG3 693 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 GPAT2Q6NUI2 795 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 CMC1Q7Z7K0 106 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 DAGLBQ8NCG7 672 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 RDM1Q8NG50 284 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 CDC26Q8NHZ8 85 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 SOX17Q9H6I2 414 aaPredicted RBP12.02□□□□□ -0.49
PTPN1-201ENST00000371621 SEPT9Q9UHD8 586 aaPredicted RBP12.02□□□□□ -0.49
PTPN1-201ENST00000371621 ILVBLA1L0T0 632 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 TRIM13O60858 407 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 SPRP35270 261 aaPredicted RBP12.02□□□□□ -0.49
PTPN1-201ENST00000371621 FMO1Q01740 532 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 FAM83EQ2M2I3 478 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 RAP1GAP2Q684P5 730 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 MCFD2Q8NI22 146 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 PIGBQ92521 554 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 BHMTQ93088 406 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 COPS4Q9BT78 406 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 C9orf16Q9BUW7 83 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 TXLNGYQ9BZA5 131 aa12.02□□□□□ -0.49
PTPN1-201ENST00000371621 CROCCQ5TZA2 2017 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 EIF2S1P05198 315 aaKnown RBP12.01□□□□□ -0.49
PTPN1-201ENST00000371621 LRPAP1P30533 357 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 NDST2P52849 883 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 RAB14P61106 215 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 FCHO2Q0JRZ9 810 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 CLEC16AQ2KHT3 1053 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 MTERF2Q49AM1 385 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SLC15A3Q8IY34 581 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 GRIN3AQ8TCU5 1115 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 PHF21BQ96EK2 531 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 NYXQ9GZU5 481 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ITGA11Q9UKX5 1188 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 FAM25AB3EWG3 89 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 FAM25CB3EWG5 89 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 FAM25GB3EWG6 89 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 UBDO15205 165 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ITGAXP20702 1163 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ACADVLP49748 655 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SLC7A2P52569 658 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 CCNIQ14094 377 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 DPYSL3Q14195 570 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 PIGHQ14442 188 aaPredicted RBP12.01□□□□□ -0.49
PTPN1-201ENST00000371621 PPM1JQ5JR12 505 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 NPNTQ6UXI9 565 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SV2AQ7L0J3 742 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF720Q7Z2F6 126 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 UNC45BQ8IWX7 931 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ZDHHC14Q8IZN3 488 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 MIER2Q8N344 545 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 KBTBD7Q8WVZ9 684 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SEPT1Q8WYJ6 367 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ZHX1-C8orf76Q96EF9 292 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 MSTO1Q9BUK6 570 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 WDR12Q9GZL7 423 aaKnown RBP12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SLC38A10Q9HBR0 1119 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ASNSD1Q9NWL6 643 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 RUVBL2Q9Y230 463 aaKnown RBP12.01□□□□□ -0.49
PTPN1-201ENST00000371621 TRIM24O15164 1050 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 MTSS1O43312 755 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SERPINB7O75635 380 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SUPT7LO94864 414 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 RGS7P49802 495 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 PRELPP51888 382 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SLC18A2Q05940 514 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 TUBA3EQ6PEY2 450 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ADGRD1Q6QNK2 874 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 STRA8Q7Z7C7 330 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ASZ1Q8WWH4 475 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 OLFM1Q99784 485 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 EHD3Q9NZN3 535 aa12.01□□□□□ -0.49
PTPN1-201ENST00000371621 SRP68Q9UHB9 627 aaKnown RBP12.01□□□□□ -0.49
PTPN1-201ENST00000371621 RGPD8O14715 1765 aaPredicted RBP12.01□□□□□ -0.49
PTPN1-201ENST00000371621 ASTN1O14525 1302 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 DLG5Q8TDM6 1919 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 MAGEB2O15479 319 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 FUCA1P04066 466 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 PSAPP07602 524 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms