RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 USP12O75317 370 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ZNF7P17097 686 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 JAM2P57087 298 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 FAM171A1Q5VUB5 890 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 MFSD5Q6N075 450 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 CRELD2Q6UXH1 353 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ITIH5Q86UX2 942 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 BBS7Q8IWZ6 715 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 DMAC2Q9NW81 257 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ARMCX1Q9P291 453 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 DCXO43602 365 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ZCCHC18P0CG32 403 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 PSMB4P28070 264 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 S100A5P33763 92 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 PRIM2P49643 509 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ELF3P78545 371 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 PTP4A2Q12974 167 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 CSTF3Q12996 717 aaKnown RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 DDX39BQ13838 428 aaKnown RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 NR6A1Q15406 480 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 FUT11Q495W5 492 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 TRABD2AQ86V40 505 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 TTC30AQ86WT1 665 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 UCMAQ8WVF2 138 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 FAM136AQ96C01 138 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 SLC25A23Q9BV35 468 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ACTR8Q9H981 624 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 SLC25A13Q9UJS0 675 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 DERAQ9Y315 318 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 MZF1P28698 734 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 MATKP42679 507 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 BTKQ06187 659 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 NPNTQ6UXI9 565 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 ZCCHC23Q6ZST2 131 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 CATSPER2Q96P56 530 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 POLR1EQ9GZS1 481 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 MORF4L1Q9UBU8 362 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 FZD1Q9UP38 647 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 PTCH2Q9Y6C5 1203 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 A0A087X1B8 175 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 VPS4BO75351 444 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 CLPTM1O96005 669 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 SERPINH1P50454 418 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 HADHBP55084 474 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 PACS2Q86VP3 889 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 TTC30BQ8N4P2 665 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 ELOVL6Q9H5J4 265 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 RNPEPL1Q9HAU8 725 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 GIMAP4Q9NUV9 329 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 RPL26L1Q9UNX3 145 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 DLG5Q8TDM6 1919 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 CLUHO75153 1309 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 C15orf38-AP3S2A0A0A6YYH1 394 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 PIGNO95427 931 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 HNRNPCP07910 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 TKTP29401 623 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 RPL14P50914 215 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 RAD23AP54725 363 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 MAD2L1Q13257 205 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 LBX2Q6XYB7 198 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 ARPINQ7Z6K5 226 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 MICU2Q8IYU8 434 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 LPCAT1Q8NF37 534 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 VPS33AQ96AX1 596 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 ADAM2Q99965 735 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 NIFKQ9BYG3 293 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 IKZF4Q9H2S9 585 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM124BQ9H5Z6 455 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 UTP6Q9NYH9 597 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 PCDHA11Q9Y5I1 949 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM95CA0A1B0GW59 222 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 SYNDIG1LA6NDD5 238 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 TMEM114B3SHH9 223 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 ERVK-10P10266 1014 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 FASP25445 335 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 RPL9P32969 192 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 INHBEP58166 350 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 FASTKQ14296 549 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 LRRC8DQ7L1W4 858 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 STX19Q8N4C7 294 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 POU5F2Q8N7G0 328 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 OR52K1Q8NGK4 314 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 NKD2Q969F2 451 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 DHX33Q9H6R0 707 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 NDUFAF1Q9Y375 327 aa12.08□□□□□ -0.48
DEPDC1-201ENST00000370966 B4GALT5O43286 388 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 C4BPAP04003 597 aaKnown RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 ARF4P18085 180 aaPredicted RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 RANBP1P43487 201 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 RUNX1T1Q06455 604 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 CASP10Q92851 521 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 UROC1Q96N76 676 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 ATXN3LQ9H3M9 355 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 CNGB3Q9NQW8 809 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms