RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 NTRK1P04629 796 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CYP2C8P10632 490 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 GHRP10912 638 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 SLC2A3P11169 496 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 EPORP19235 508 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 IL12AP29459 219 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 HPCAL1P37235 193 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 IFNGR2P38484 337 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ACOX1Q15067 660 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ARMC8Q8IUR7 673 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 FAR1Q8WVX9 515 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 KCNH7Q9NS40 1196 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 PRMT7Q9NVM4 692 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 IKZF3Q9UKT9 509 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 RNASEH1O60930 286 aaKnown RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CYP4B1P13584 511 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 MAD2L1Q13257 205 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 AP5B1Q2VPB7 878 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CCDC115Q96NT0 180 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 RBM22Q9NW64 420 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CNTNAP2Q9UHC6 1331 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 H7C0S8 307 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 SERPINE1P05121 402 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 NFKB1P19838 968 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ABCG1P45844 678 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CD151P48509 253 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 KPNA1P52294 538 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 IL2P60568 153 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ELF3P78545 371 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 FAM220AQ7Z4H9 259 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 FRMD8P1Q9BZ68 369 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 GTF3C4Q9UKN8 822 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 SHOC2Q9UQ13 582 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 R3HDM2Q9Y2K5 976 aaKnown RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 MGAT5Q09328 741 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 PRKAA1Q13131 559 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 RFX4Q33E94 735 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 GLT6D1Q7Z4J2 308 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CCNJLQ8IV13 435 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 DSN1Q9H410 356 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ANKZF1Q9H8Y5 726 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 AHSPQ9NZD4 102 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CKMP06732 381 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 TYMPP19971 482 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 NEK3P51956 506 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 TTC7BQ86TV6 843 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 VPS35Q96QK1 796 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-203ENST00000370096 C8orf4Q9NR00 106 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ANAPC2Q9UJX6 822 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ZNF609O15014 1411 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CASTOR2A6NHX0 329 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 H3BMM5 538 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 CHRNGP07510 517 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 DNAJB2P25686 324 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 HSF2Q03933 536 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 SLC41A1Q8IVJ1 513 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 TSPAN14Q8NG11 270 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ACTRT1Q8TDG2 376 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 SLC24A2Q9UI40 661 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 PMF1-BGLAPU3KQ54 211 aa11.3□□□□□ -0.6
COL11A1-203ENST00000370096 ZNF879B4DU55 563 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 GMFGO60234 142 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 ANXA6P08133 673 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 CKBP12277 381 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 SLC25A3Q00325 362 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 SRSF11Q05519 484 aaKnown RBP11.29□□□□□ -0.6
COL11A1-203ENST00000370096 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 MSLNQ13421 630 aaPredicted RBP11.29□□□□□ -0.6
COL11A1-203ENST00000370096 GPAT3Q53EU6 434 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 ZFP1Q6P2D0 407 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 TUBE1Q9UJT0 475 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 LGR5O75473 907 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 STX11O75558 287 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 CDK16Q00536 496 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 TMEM132BQ14DG7 1078 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 HTRA1Q92743 480 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 SLC5A5Q92911 643 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 NSUN4Q96CB9 384 aaKnown RBP11.29□□□□□ -0.6
COL11A1-203ENST00000370096 APOPT1Q96IL0 206 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 GSDMCQ9BYG8 508 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 TCOF1Q13428 1488 aaKnown RBP11.29□□□□□ -0.6
COL11A1-203ENST00000370096 CD3EAPO15446 510 aaKnown RBP11.29□□□□□ -0.6
COL11A1-203ENST00000370096 RGS14O43566 566 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 S100A3P33764 101 aa11.29□□□□□ -0.6
COL11A1-203ENST00000370096 SLC26A3P40879 764 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms