RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SLC9A8Q9Y2E8 581 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 ALKQ9UM73 1620 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 MGAT5Q09328 741 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 FRG1Q14331 258 aaKnown RBP12.69□□□□□ -0.38
HCFC1-202ENST00000369984 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 REPS1Q96D71 796 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 COMMD9Q9P000 198 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 A0A087WXM4 84 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 JCHAINP01591 159 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 GHRP10912 638 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 HSD3B2P26439 372 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 MZT2AQ6P582 158 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 ITGB1BP2Q9UKP3 347 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 LYVE1Q9Y5Y7 322 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 DCXO43602 365 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 VTNP04004 478 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CD151P48509 253 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RGS21Q2M5E4 152 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 SAMD4BQ5PRF9 694 aaKnown RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 GLT6D1Q7Z4J2 308 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 POU5F2Q8N7G0 328 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 ACTRT2Q8TDY3 377 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 TMEM169Q96HH4 297 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 PCDH9Q9HC56 1237 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 PLA2G4CQ9UP65 541 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 PCDH8O95206 1070 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 GLI1P08151 1106 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RHOAP61586 193 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 USF2Q15853 346 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 PROSER1Q86XN7 944 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 TMEM176AQ96HP8 235 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 ZFYVE28Q9HCC9 887 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 MSH4O15457 936 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 ZC3H11AO75152 810 aaKnown RBP eCLIP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 GZMAP12544 262 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 OR7A2PQ8NGA2 310 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 REEP1Q9H902 201 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 TLR8Q9NR97 1041 aaKnown RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CHURC1-FNTBB4DL54 471 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RGS14O43566 566 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 FBXO21O94952 628 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CCDC166P0CW27 439 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 H2AFXP16104 143 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 ME2P23368 584 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RHAGQ02094 409 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 TIMM50Q3ZCQ8 353 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 DNAJC14Q6Y2X3 702 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 FAM131BQ86XD5 332 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 POMKQ9H5K3 350 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 SMCO3A2RU48 225 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 IDH3BO43837 385 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 TRIM3O75382 744 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RRM1P23921 792 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 LHX1P48742 406 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF157P51786 506 aaPredicted RBP12.68□□□□□ -0.38
HCFC1-202ENST00000369984 DHRSXQ8N5I4 330 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 APBA2Q99767 749 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CISHQ9NSE2 258 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 C15orf41Q9Y2V0 281 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 OGTO15294 1046 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 FGRP09769 529 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 MFSD7Q6UXD7 560 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RNF19BQ6ZMZ0 732 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RNF180Q86T96 592 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 IQCF2Q8IXL9 164 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 RNF148Q8N7C7 305 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 B3GALT6Q96L58 329 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 ZNRF3Q9ULT6 936 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 LRRC14BA6NHZ5 514 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CHP2O43745 196 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 ETS1P14921 441 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CYP2B6P20813 491 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 STAT5AP42229 794 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 HASPINQ8TF76 798 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CITED4Q96RK1 184 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 CDRT15Q96T59 188 aa12.68□□□□□ -0.38
HCFC1-202ENST00000369984 EPS8Q12929 822 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 PYDC2Q56P42 97 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 CD302Q8IX05 232 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 OR56A4Q8NGH8 313 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 NMRAL1Q9HBL8 299 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 TMEM138Q9NPI0 162 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 MADDQ8WXG6 1647 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 A0A087X1B8 175 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 PSMD11O00231 422 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 ATP5BP06576 529 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 THP07101 528 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 STAG3L1P0CL83 205 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 PGAM1P18669 254 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 MAPK9P45984 424 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms