RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 OR51B4Q9Y5P0 310 aa21.2■□□□□ 0.98
SMNDC1-201ENST00000369592 CNOT1A5YKK6 2376 aaKnown RBP21.2■□□□□ 0.98
SMNDC1-201ENST00000369592 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 C2CD4BA6NLJ0 364 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 ASLP04424 464 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 EPHX1P07099 455 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 FERP16591 822 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 PTGER3P43115 390 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 ARID5AQ03989 594 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 DEUP1Q05D60 604 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 SLC12A1Q13621 1099 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 CDH18Q13634 790 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 SF3A2Q15428 464 aaKnown RBP21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 CCDC6Q16204 474 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 E4F1Q66K89 784 aaPredicted RBP21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 SLC36A4Q6YBV0 504 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 LPCAT2Q7L5N7 544 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 LUZP1Q86V48 1076 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 CIR1Q86X95 450 aaPredicted RBP21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 TMEFF1Q8IYR6 380 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 APCDD1Q8J025 514 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 EMC1Q8N766 993 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 OR52K2Q8NGK3 314 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 OR2T3Q8NH03 318 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 CENPIQ92674 756 aaPredicted RBP21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 RNF34Q969K3 372 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 CFAP57Q96MR6 1250 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 TKTL2Q9H0I9 626 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 PRDM16Q9HAZ2 1276 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 PRSS16Q9NQE7 514 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 METTL5Q9NRN9 209 aaKnown RBP21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 TBC1D30Q9Y2I9 924 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 ITIH6Q6UXX5 1313 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 NYNRINQ9P2P1 1898 aaKnown RBP21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 CHD5Q8TDI0 1954 aa21.19■□□□□ 0.98
SMNDC1-201ENST00000369592 IGLV3-10A0A075B6K4 115 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 DRGXA6NNA5 263 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 SYNCRIPO60506 623 aaKnown RBP21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 CAVIN2O95810 425 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 VASPP50552 380 aaPredicted RBP21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 CREB5Q02930 508 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 ZSCAN23Q3MJ62 389 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 CCDC14Q49A88 953 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 FILIP1LQ4L180 1135 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 FNDC3BQ53EP0 1204 aaKnown RBP21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 RAB6CQ53S08 254 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 RABGAP1LQ5R372 815 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 JOSD2Q8TAC2 188 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 EDEM3Q9BZQ6 932 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 RAB6CQ9H0N0 254 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 SMOC1Q9H4F8 434 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 TMPRSS4Q9NRS4 437 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 RXFP3Q9NSD7 469 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 AIPL1Q9NZN9 384 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 ZNF212Q9UDV6 495 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 VANGL2Q9ULK5 521 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 CYP8B1Q9UNU6 501 aa21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 MAP1BP46821 2468 aaKnown RBP21.18■□□□□ 0.98
SMNDC1-201ENST00000369592 H0Y626 953 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 ZBTB24O43167 697 aaPredicted RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 GDF9O60383 454 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 SRPRAP08240 638 aaKnown RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 SDHBP21912 280 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 RDXP35241 583 aaKnown RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 GGCXP38435 758 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 CTSOP43234 321 aaPredicted RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 PTPN9P43378 593 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 LIMK1P53667 647 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 C1QBPQ07021 282 aaKnown RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 FIGNQ5HY92 759 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 PPP1R15BQ5SWA1 713 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 ACBD5Q5T8D3 534 aaPredicted RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 SLC41A1Q8IVJ1 513 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 ZNF366Q8N895 744 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 RXFP2Q8WXD0 754 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 ZNF419Q96HQ0 510 aaPredicted RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 RPRD1AQ96P16 312 aaPredicted RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 HAPLN3Q96S86 360 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 FBRSQ9HAH7 460 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 WSB2Q9NYS7 404 aaPredicted RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 ADAM22Q9P0K1 906 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 CDV3Q9UKY7 258 aaKnown RBP21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 ERVW-1Q9UQF0 538 aa21.17■□□□□ 0.98
SMNDC1-201ENST00000369592 CLDN11O75508 207 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 GJB6O95452 261 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 MZF1P28698 734 aaPredicted RBP21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 PRKCIP41743 596 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 NSFP46459 744 aaKnown RBP21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 DHPSP49366 369 aaPredicted RBP21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 TPMTP51580 245 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 HNRNPA1L2Q32P51 320 aaKnown RBP21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 KIAA1324Q6UXG2 1013 aaKnown RBP21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 C3orf20Q8ND61 904 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 NETO1Q8TDF5 533 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 SIPA1Q96FS4 1042 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 TMEM74BQ9NUR3 256 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 SUN2Q9UH99 717 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 PILRBQ9UKJ0 227 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 PAXBP1Q9Y5B6 917 aa21.16■□□□□ 0.98
SMNDC1-201ENST00000369592 SNX10Q9Y5X0 201 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms