RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 CCNFP41002 786 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 SERPINB4P48594 390 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 LHX1P48742 406 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 PSMC1P62191 440 aaKnown RBP27.24■■□□□ 1.95
EFNA1-202ENST00000368407 YWHAHQ04917 246 aaPredicted RBP27.24■■□□□ 1.95
EFNA1-202ENST00000368407 DNAL1Q4LDG9 190 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 RTP2Q5QGT7 225 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 RNF168Q8IYW5 571 aaPredicted RBP27.24■■□□□ 1.95
EFNA1-202ENST00000368407 C12orf29Q8N999 325 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 ZNF184Q99676 751 aaPredicted RBP27.24■■□□□ 1.95
EFNA1-202ENST00000368407 LHX5Q9H2C1 402 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 PCDHB12Q9Y5F1 795 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 TEX264Q9Y6I9 313 aa27.24■■□□□ 1.95
EFNA1-202ENST00000368407 WDR91A4D1P6 747 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 CST8O60676 142 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 BANF1O75531 89 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 INHBAP08476 426 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 CD19P15391 556 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 FGFR3P22607 806 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 SSTR3P32745 418 aaPredicted RBP27.23■■□□□ 1.95
EFNA1-202ENST00000368407 TUBP50607 506 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 GDF10P55107 478 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 ELAVL2Q12926 359 aaKnown RBP27.23■■□□□ 1.95
EFNA1-202ENST00000368407 RCN2Q14257 317 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 HAUS1Q96CS2 278 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 HEXIM2Q96MH2 286 aaKnown RBP27.23■■□□□ 1.95
EFNA1-202ENST00000368407 SIKE1Q9BRV8 207 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 ARHGEF4Q9NR80 690 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 DLGAP2Q9P1A6 1054 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 SORCS3Q9UPU3 1222 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 YBX2Q9Y2T7 364 aaKnown RBP27.23■■□□□ 1.95
EFNA1-202ENST00000368407 KIAA1671Q9BY89 1806 aa27.23■■□□□ 1.95
EFNA1-202ENST00000368407 TSC2P49815 1807 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 ARHGEF37A1IGU5 675 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 GOLGA8SH3BPF8 625 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 GOLGA8MH3BSY2 632 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 CHADO15335 359 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 BMP8BP34820 402 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 BBS9Q3SYG4 887 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 VARS2Q5ST30 1063 aaKnown RBP27.22■■□□□ 1.95
EFNA1-202ENST00000368407 TTC39BQ5VTQ0 682 aaPredicted RBP27.22■■□□□ 1.95
EFNA1-202ENST00000368407 ATG16L1Q676U5 607 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 MRRFQ96E11 262 aaKnown RBP27.22■■□□□ 1.95
EFNA1-202ENST00000368407 C17orf80Q9BSJ5 609 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 C1orf21Q9H246 121 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 EME2A4GXA9 379 aaPredicted RBP27.22■■□□□ 1.95
EFNA1-202ENST00000368407 PGM1P36871 562 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 C6orf163Q5TEZ5 329 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 ADGRG6Q86SQ4 1221 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 SLC26A11Q86WA9 606 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 KLHL23Q8NBE8 558 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 CMASQ8NFW8 434 aaPredicted RBP27.22■■□□□ 1.95
EFNA1-202ENST00000368407 OR10T2Q8NGX3 314 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 SERAC1Q96JX3 654 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 TMEM209Q96SK2 561 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 WWP1Q9H0M0 922 aa27.22■■□□□ 1.95
EFNA1-202ENST00000368407 TCRBV9S1A1TA0A576 114 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 FGF18O76093 207 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 OAZ2O95190 189 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 PSMA2P25787 234 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 PPM1AP35813 382 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 DPYSL3Q14195 570 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 CRYBG2Q8N1P7 616 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 ARHGAP18Q8N392 663 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 PDCD7Q8N8D1 485 aaKnown RBP27.21■■□□□ 1.95
EFNA1-202ENST00000368407 SPATA18Q8TC71 538 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 TTPALQ9BTX7 342 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 FAM49BQ9NUQ9 324 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 VWA8A3KMH1 1905 aa27.21■■□□□ 1.95
EFNA1-202ENST00000368407 TRDMT1O14717 391 aaKnown RBP27.2■■□□□ 1.95
EFNA1-202ENST00000368407 MCF2LO15068 1137 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 LRCH4O75427 683 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 MYL2P10916 166 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 CTNNB1P35222 781 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 BMPR1AP36894 532 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 GAD2Q05329 585 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 KCNJ11Q14654 390 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 LGSNQ5TDP6 509 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 KYAT3Q6YP21 454 aaKnown RBP27.2■■□□□ 1.95
EFNA1-202ENST00000368407 WDTC1Q8N5D0 677 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 FAM111AQ96PZ2 611 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 PBX4Q9BYU1 374 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 FBXO6Q9NRD1 293 aaPredicted RBP27.2■■□□□ 1.95
EFNA1-202ENST00000368407 PCDHA11Q9Y5I1 949 aa27.2■■□□□ 1.95
EFNA1-202ENST00000368407 BGNP21810 368 aa27.2■■□□□ 1.94
EFNA1-202ENST00000368407 MRPL58Q14197 206 aaKnown RBP27.2■■□□□ 1.94
EFNA1-202ENST00000368407 TDHQ8IZJ6 230 aa27.2■■□□□ 1.94
EFNA1-202ENST00000368407 B3GALNT2Q8NCR0 500 aa27.2■■□□□ 1.94
EFNA1-202ENST00000368407 WDR60Q8WVS4 1066 aa27.2■■□□□ 1.94
EFNA1-202ENST00000368407 CRTAC1Q9NQ79 661 aa27.2■■□□□ 1.94
EFNA1-202ENST00000368407 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.19■■□□□ 1.94
EFNA1-202ENST00000368407 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.19■■□□□ 1.94
EFNA1-202ENST00000368407 CARNS1A5YM72 827 aa27.19■■□□□ 1.94
EFNA1-202ENST00000368407 TM7SF2O76062 418 aa27.19■■□□□ 1.94
EFNA1-202ENST00000368407 SOD2P04179 222 aa27.19■■□□□ 1.94
EFNA1-202ENST00000368407 PTPN1P18031 435 aaKnown RBP27.19■■□□□ 1.94
EFNA1-202ENST00000368407 USP41Q3LFD5 358 aa27.19■■□□□ 1.94
EFNA1-202ENST00000368407 CHRDL2Q6WN34 429 aa27.19■■□□□ 1.94
EFNA1-202ENST00000368407 MTBPQ96DY7 904 aa27.19■■□□□ 1.94
EFNA1-202ENST00000368407 TNIP3Q96KP6 325 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms