RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SYT12Q8IV01 421 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 CYP4X1Q8N118 509 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 PIK3R5Q8WYR1 880 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 PHF21BQ96EK2 531 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 NSMCE2Q96MF7 247 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 ADGRB3O60242 1522 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 MYPNQ86TC9 1320 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 MYL12BO14950 172 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 ADCY6O43306 1168 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 ZNF862O60290 1169 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 IL1R1P14778 569 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 LBPP18428 481 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 PACS1Q6VY07 963 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 PEG10Q86TG7 708 aaKnown RBP16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 ACTRT2Q8TDY3 377 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 APOL4Q9BPW4 351 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 CLEC4MQ9H2X3 399 aaPredicted RBP16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 TNFSF13BQ9Y275 285 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 PNPLA6Q8IY17 1366 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 HTR3CQ8WXA8 447 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 RACGAP1Q9H0H5 632 aa16.01■□□□□ 0.15
NUCKS1-201ENST00000367142 ITGA1P56199 1179 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 KPNB1Q14974 876 aaKnown RBP16■□□□□ 0.15
NUCKS1-201ENST00000367142 RBM43Q6ZSC3 357 aaKnown RBP16■□□□□ 0.15
NUCKS1-201ENST00000367142 CEP68Q76N32 757 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 SLC47A2Q86VL8 602 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 UXS1Q8NBZ7 420 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 MIR1-1HGQ9H1L0 117 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 OPTCQ9UBM4 332 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 NDUFAF1Q9Y375 327 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 MED14O60244 1454 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 TPH1P17752 444 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 MMP13P45452 471 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 TRIM25Q14258 630 aaKnown RBP16■□□□□ 0.15
NUCKS1-201ENST00000367142 SLC30A9Q6PML9 568 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 MDM1Q8TC05 714 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 ASZ1Q8WWH4 475 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 ASB2Q96Q27 587 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 FANCEQ9HB96 536 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 ABCC13Q9NSE7 274 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 A0A087X1B8 175 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 SMNDC1O75940 238 aaKnown RBP eCLIP16■□□□□ 0.15
NUCKS1-201ENST00000367142 HOXB8P17481 243 aaPredicted RBP16■□□□□ 0.15
NUCKS1-201ENST00000367142 FASP25445 335 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 KRT73Q86Y46 540 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 UGT2B28Q9BY64 529 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 ZMYM5Q9UJ78 669 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 PSME2Q9UL46 239 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 PCDHA3Q9Y5H8 950 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 TAF6LQ9Y6J9 622 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 BCLAF3A2AJT9 711 aaKnown RBP16■□□□□ 0.15
NUCKS1-201ENST00000367142 BTN3A1O00481 513 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 FBXW10Q5XX13 1052 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 FAM83AQ86UY5 434 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 METTL6Q8TCB7 284 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 CATSPER2Q96P56 530 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 POLR1EQ9GZS1 481 aaKnown RBP16■□□□□ 0.15
NUCKS1-201ENST00000367142 KIAA1683Q9H0B3 1180 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 AASDHPPTQ9NRN7 309 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 GPSM3Q9Y4H4 160 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 CCDC130P13994 396 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 KLRK1P26718 216 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 CTNNB1P35222 781 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 FAM126AQ9BYI3 521 aaPredicted RBP16■□□□□ 0.15
NUCKS1-201ENST00000367142 ASAH2Q9NR71 780 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 TRPM1Q7Z4N2 1603 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 WDR27A2RRH5 827 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 PIK3CDO00329 1044 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 LTFP02788 710 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 RARGP13631 454 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 BGNP21810 368 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 FMO4P31512 558 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 HNMTP50135 292 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 IQSEC1Q6DN90 963 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 ZBTB49Q6ZSB9 765 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 ERLEC1Q96DZ1 483 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 TBCDQ9BTW9 1192 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 KLHL4Q9C0H6 718 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 PCDH9Q9HC56 1237 aa16■□□□□ 0.15
NUCKS1-201ENST00000367142 MGRN1O60291 552 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 CATP04040 527 aaKnown RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PSMB9P28065 219 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 SNRPD1P62314 119 aaKnown RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PMF1Q6P1K2 205 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PRR23CQ6ZRP0 262 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 RNF44Q7L0R7 432 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 FAM220AQ7Z4H9 259 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 ZFP28Q8NHY6 868 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 FAIM2Q9BWQ8 316 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 UNKQ9C0B0 810 aaKnown RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 EPB41L4BQ9H329 900 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 VAV3Q9UKW4 847 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 TSC22D2O75157 780 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 DDNO94850 711 aaPredicted RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 COX7A2P14406 83 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 GP5P40197 560 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 SETD9Q8NE22 299 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 BDH2Q9BUT1 245 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PDGFDQ9GZP0 370 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms