RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 LIPMQ5VYY2 423 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 ZNF470Q6ECI4 717 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 LAYNQ6UX15 382 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 E2F8A0AVK6 867 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 PSMD12O00232 456 aaPredicted RBP12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 MRASO14807 208 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 MGAT1P26572 445 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 PTCD3Q96EY7 689 aaKnown RBP12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 NSMCE2Q96MF7 247 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 LNPEPQ9UIQ6 1025 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 CLCN3P51790 818 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 NFYCQ13952 458 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 BBS7Q8IWZ6 715 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 REPS2Q8NFH8 660 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 SGF29Q96ES7 293 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 KREMEN1Q96MU8 473 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 RAB26Q9ULW5 256 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 GCLCP48506 637 aaPredicted RBP12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 KIZQ2M2Z5 673 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 VTA1Q9NP79 307 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 LSM7Q9UK45 103 aaKnown RBP12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 A0A1B0GUL6 1792 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 ADGRA2Q96PE1 1338 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 HNRNPCL2B2RXH8 293 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 FKBP9O95302 570 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 TWF1Q12792 350 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 FKBP9P1Q75LS8 142 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 TBC1D19Q8N5T2 526 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 USP33Q8TEY7 942 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 ATXN10Q9UBB4 475 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 FAM237BA0A1B0GVD1 139 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 CYB561D2O14569 222 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 UQCRBP14927 111 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 DHRSXQ8N5I4 330 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 LAMB1P07942 1786 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 CD3EAPO15446 510 aaKnown RBP12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 RAP1GAPP47736 663 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 ADARP55265 1226 aaKnown RBP12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 CENPLQ8N0S6 344 aaPredicted RBP12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 TMEM86AQ8N2M4 240 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 ADCY4Q8NFM4 1077 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 BPGMP07738 259 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 CCNB1P14635 433 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 PCSK2P16519 638 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 TCEAL1Q15170 157 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 AADACL2Q6P093 401 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 ZSWIM2Q8NEG5 633 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 GORASP1Q9BQQ3 440 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 GPR63Q9BZJ6 419 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 LMCD1Q9NZU5 365 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 MAP3K13O43283 966 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 ANXA6P08133 673 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 CPB1P15086 417 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 LRPAP1P30533 357 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 POPDC2Q9HBU9 364 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 NOCTQ9UK39 431 aaKnown RBP12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 TPRKBQ9Y3C4 175 aa12.02□□□□□ -0.48
CDC42BPA-202ENST00000366764 ACE2Q9BYF1 805 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 SPATC1LQ9H0A9 340 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 FBXO44Q9H4M3 255 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 WWOXQ9NZC7 414 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 USP54Q70EL1 1684 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 PGK2P07205 417 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 CCDC159P0C7I6 412 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 SLC27A1Q6PCB7 646 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 RRM2BQ7LG56 351 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 DMTF1Q9Y222 760 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 ATP5F1P24539 256 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 RBL1P28749 1068 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 RPL7AP62424 266 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 FBXW8Q8N3Y1 598 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZDHHC18Q9NUE0 388 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 DMAC2Q9NW81 257 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 TNPO3Q9Y5L0 923 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 C10orf71Q711Q0 1435 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 NUP214P35658 2090 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 TPST1O60507 370 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 CDKN2BP42772 138 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZNF317Q96PQ6 595 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 ITGA2BP08514 1039 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 GSCP56915 257 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 DEPDC1Q5TB30 811 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 BHLHE22Q8NFJ8 381 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 TBL1YQ9BQ87 522 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 RAB15P59190 212 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 MRPS22P82650 360 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 KDELC2Q7Z4H8 507 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 SEC14L1Q92503 715 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 CLPBQ9H078 707 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 USE1Q9NZ43 259 aa12.02□□□□□ -0.49
CDC42BPA-202ENST00000366764 MAPRE3Q9UPY8 281 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms