RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ATP9BO43861 1147 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 IL1BP01584 269 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 RALBP11234 206 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 EPHA3P29320 983 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 NIPAL4Q0D2K0 466 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 FAM72AQ5TYM5 149 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 IL31Q6EBC2 164 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 FAM72DQ6L9T8 149 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 FAM72BQ86X60 149 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 PDSS2Q86YH6 399 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 DCLK2Q8N568 766 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 SLC35F5Q8WV83 523 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 ATP2A3Q93084 1043 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 NMD3Q96D46 503 aaKnown RBP10.85□□□□□ -0.67
SMC3-201ENST00000361804 MFSD3Q96ES6 412 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 C16orf70Q9BSU1 422 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
SMC3-201ENST00000361804 C2orf40Q9H1Z8 148 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 SNX15Q9NRS6 342 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 MPSTP25325 297 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 NUMBP49757 651 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 ZNF460Q14592 562 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 LDLRAD1Q5T700 205 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 FAM91A1Q658Y4 838 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 MTHFD1LQ6UB35 978 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 LENG8Q96PV6 779 aaPredicted RBP10.85□□□□□ -0.67
SMC3-201ENST00000361804 PTPN18Q99952 460 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 COPG2Q9UBF2 871 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 GCATO75600 419 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 IL18RAPO95256 599 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 CYP2C8P10632 490 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 ACAT1P24752 427 aaKnown RBP10.85□□□□□ -0.67
SMC3-201ENST00000361804 HSP90AA5PQ58FG0 334 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 CDKL3Q8IVW4 592 aaPredicted RBP10.85□□□□□ -0.67
SMC3-201ENST00000361804 RNF169Q8NCN4 708 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 ZNF669Q96BR6 464 aaPredicted RBP10.85□□□□□ -0.67
SMC3-201ENST00000361804 CDCA5Q96FF9 252 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 CDHR5Q9HBB8 845 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 ANLNQ9NQW6 1124 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 TK2O00142 265 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 BEST1O76090 585 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 ACAP1Q15027 740 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 CERCAMQ5T4B2 595 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 TRIM42Q8IWZ5 723 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 MCUQ8NE86 351 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 QKIQ96PU8 341 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMC3-201ENST00000361804 ZNF670Q9BS34 389 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 FAM49AQ9H0Q0 323 aaPredicted RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 PRDM12Q9H4Q4 367 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 DDX43Q9NXZ2 648 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 INPP5FQ9Y2H2 1132 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 H3BNX3 289 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 NELFEP18615 380 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 TKTP29401 623 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 MRPS22P82650 360 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 INCA1Q0VD86 236 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 PKDCCQ504Y2 493 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 DCAF6Q58WW2 860 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 HFE2Q6ZVN8 426 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 RPS27LQ71UM5 84 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 ZNF567Q8N184 647 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 UBE2OQ9C0C9 1292 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 FIS1Q9Y3D6 152 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 FRMPD3Q5JV73 1810 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 TMEM233B4DJY2 109 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 SPTLC1O15269 473 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 PHGDHO43175 533 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 SERPINE1P05121 402 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 ABCE1P61221 599 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 CAP1Q01518 475 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 SEMA5AQ13591 1074 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 ZRSR2Q15696 482 aaKnown RBP10.84□□□□□ -0.67
SMC3-201ENST00000361804 ZNF792Q3KQV3 632 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 SYPL2Q5VXT5 272 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 SLC2A14Q8TDB8 520 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 FAM167AQ96KS9 214 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 MAF1Q9H063 256 aa10.84□□□□□ -0.67
SMC3-201ENST00000361804 BIRC5O15392 142 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 SNAI1O95863 264 aaPredicted RBP10.83□□□□□ -0.68
SMC3-201ENST00000361804 ATP6V1B1P15313 513 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 VCLP18206 1134 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 MAGEA6P43360 314 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 NUDT2P50583 147 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 RBP5P82980 135 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 BTKQ06187 659 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 RBBP5Q15291 538 aaKnown RBP10.83□□□□□ -0.68
SMC3-201ENST00000361804 MMEL1Q495T6 779 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 LIN52Q52LA3 116 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 TMCO4Q5TGY1 634 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 PID1Q7Z2X4 250 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 STRA8Q7Z7C7 330 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 DEFB106AQ8N104 65 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 SPATA16Q9BXB7 569 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 SLC4A5Q9BY07 1137 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 CHD9Q3L8U1 2897 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 SF3B1O75533 1304 aaKnown RBP eCLIP10.83□□□□□ -0.682e-6■■■■■ 60.3
SMC3-201ENST00000361804 A0A0A0MRY4 1105 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 I6L893 689 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms