RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 IMPDH2P12268 514 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 GRIA4P48058 902 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 NR2C2P49116 596 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 RUNX1T1Q06455 604 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 Q3C1V9 767 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 BRSK2Q8IWQ3 736 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 CAPSLQ8WWF8 208 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 RORBQ92753 470 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 BBS2Q9BXC9 721 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 ACE2Q9BYF1 805 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 POLIQ9UNA4 740 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 EFR3BQ9Y2G0 817 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 BCL9O00512 1426 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 DGUOKQ16854 277 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 MTX3Q5HYI7 312 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 DRICH1Q6PGQ1 229 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 URGCPQ8TCY9 931 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 CERS2Q96G23 380 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 PHF12Q96QT6 1004 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 NOD1Q9Y239 953 aa16.3■□□□□ 0.2
CLSTN1-201ENST00000361311 SPATA31A5Q5VU36 1347 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 SPATA31A7Q8IWB4 1347 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 FKBP9O95302 570 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 TRUB2O95900 331 aaKnown RBP16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 JCHAINP01591 159 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 IL5RAQ01344 420 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 FKBP9P1Q75LS8 142 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 EFL1Q7Z2Z2 1120 aaKnown RBP16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 CMC1Q7Z7K0 106 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 MKL1Q969V6 931 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 TSPAN16Q9UKR8 245 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 LINC00854A0A1B0GVQ3 168 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 TMEM114B3SHH9 223 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 TRAFD1O14545 582 aaPredicted RBP16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 ANXA9O76027 345 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 MICAL2O94851 1124 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 PLK1P53350 603 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 DPYSQ14117 519 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 FRG1Q14331 258 aaKnown RBP16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 ZNF384Q8TF68 577 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 MFSD14AQ96MC6 490 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 NOL11Q9H8H0 719 aaKnown RBP16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 PIK3C2AO00443 1686 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 MAGEB16A2A368 324 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 CRTAMO95727 393 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 ETFBP38117 255 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 HPCAP84074 193 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 KIZQ2M2Z5 673 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 NPAS2Q99743 824 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 APBA2Q99767 749 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 SH3GL1Q99961 368 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 PRMT7Q9NVM4 692 aaPredicted RBP16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 PPME1Q9Y570 386 aa16.29■□□□□ 0.2
CLSTN1-201ENST00000361311 RGS5O15539 181 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 TOMM70O94826 608 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 CLK2P49760 499 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 SLC5A3P53794 718 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 MPZL3Q6UWV2 235 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 TTC30AQ86WT1 665 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 OAS1P00973 400 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 SUPT20HL2P0C7V6 817 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 GJA8P48165 433 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 TRIM25Q14258 630 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 SUPT20HL1Q3ZLR7 823 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 SFT2D3Q587I9 215 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 CMPK2Q5EBM0 449 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 BROXQ5VW32 411 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 JOSD2Q8TAC2 188 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 CYP3A43Q9HB55 503 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 VPS45Q9NRW7 570 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 SNRPB2P08579 225 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 GNL1P36915 607 aaPredicted RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 TUBP50607 506 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 YWHAZP63104 245 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 METTL21CQ5VZV1 264 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 NIPA1Q7RTP0 329 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 AAASQ9NRG9 546 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 ANKRD6Q9Y2G4 727 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 GAKO14976 1311 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 E5RJQ4 531 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 HMGCS2P54868 508 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 POLD3Q15054 466 aaPredicted RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 ZIK1Q3SY52 487 aaPredicted RBP16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 PDSS2Q86YH6 399 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 APPL2Q8NEU8 664 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 SNX15Q9NRS6 342 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 COQ6Q9Y2Z9 468 aa16.28■□□□□ 0.2
CLSTN1-201ENST00000361311 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 TIPRLO75663 272 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 ADGRE1Q14246 886 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 SNX17Q15036 470 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 FAM98BQ52LJ0 330 aaKnown RBP16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 ZFPM1Q8IX07 1006 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 AHI1Q8N157 1196 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms